Gm50351 Gene Detail

Summary

• Symbol
  Gm50351
• Name
  predicted gene, 50351

• Feature Type
  lncRNA gene
• IDs
  MGI:6303233
  NCBI Gene: 118568384
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:82735855-82739053 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  215 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303233	lncRNA gene	Chr18:82734908-82739053 (+)
129S1/SvImJ	ENSMUSG00200029753	lncRNA gene	Chr18:79946972-79949587 (+)
A/J	ENSMUSG00195005006	lncRNA gene	Chr18:80044888-80047498 (+)
AKR/J	ENSMUSG00220017352	lncRNA gene	Chr18:79964416-79967032 (+)
BALB/cJ	ENSMUSG00180013686	lncRNA gene	Chr18:80611594-80614209 (+)
C3H/HeJ	ENSMUSG00175012882	lncRNA gene	Chr18:80151777-80154387 (+)
C57BL/6NJ	ENSMUSG00215027364	lncRNA gene	Chr18:79530749-79533360 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030041	lncRNA gene	Chr18:79061504-79064054 (+)
CBA/J	ENSMUSG00210035346	lncRNA gene	Chr18:80102252-80104864 (+)
DBA/2J	ENSMUSG00185011974	lncRNA gene	Chr18:80007574-80010185 (+)
FVB/NJ	ENSMUSG00205018071	lncRNA gene	Chr18:79415634-79418244 (+)
JF1/MsJ	ENSUMUG00000034108	lncRNA gene	Chr18:79896102-79898761 (+)
LP/J	ENSMUSG00230018607	lncRNA gene	Chr18:82049165-82051779 (+)
NOD/ShiLtJ	ENSMUSG00190025054	lncRNA gene	Chr18:79832681-79835291 (+)
NZO/HlLtJ	ENSMUSG00225023679	lncRNA gene	Chr18:81932655-81935264 (+)
PWK/PhJ	ENSLUMG00010007071	lncRNA gene	Chr18:80291391-80294171 (+)
SPRET/EiJ	ENSMSPG00010009224	lncRNA gene	Chr18:80654861-80657450 (+)
WSB/EiJ	ENSIUOG00005008416	lncRNA gene	Chr18:79465092-79467717 (+)

Homology

• Gene Tree
  Gm50351
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1

• Ensembl
  ENSMUSG00000117888 (Evidence)
• NCBI Gene
  118568384

Representative Sequences			Length	Strain/Species
genomic	118568384	NCBI Gene Model | MGI Sequence Detail	3199	C57BL/6J
transcript	XR_004940030	RefSeq | MGI Sequence Detail	1274	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;