Gm50345 Gene Detail

Summary

• Symbol
  Gm50345
• Name
  predicted gene, 50345

• Feature Type
  unclassified gene
• IDs
  MGI:6303223
• Alliance
  genome feature page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr19:9916630-9918016 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303223	unclassified gene	Chr19:9916630-9918016 (+)
129S1/SvImJ	ENSMUSG00200053249	unclassified gene	Chr19:6594330-6595716 (+)
A/J	ENSMUSG00195053406	unclassified gene	Chr19:6804168-6805550 (+)
AKR/J	ENSMUSG00220051937	unclassified gene	Chr19:6714858-6716246 (+)
BALB/cJ	ENSMUSG00180052304	unclassified gene	Chr19:7168144-7169526 (+)
C3H/HeJ	ENSMUSG00175015168	unclassified gene	Chr19:6441841-6443225 (+)
C57BL/6NJ	ENSMUSG00215047406	unclassified gene	Chr19:6511661-6513044 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043794	unclassified gene	Chr19:6302794-6304198 (+)
CBA/J	ENSMUSG00210050921	unclassified gene	Chr19:6642376-6643762 (+)
DBA/2J	ENSMUSG00185054071	unclassified gene	Chr19:7052106-7053492 (+)
FVB/NJ	ENSMUSG00205053292	unclassified gene	Chr19:6534024-6535410 (+)
JF1/MsJ	ENSUMUG00000056542	unclassified gene	Chr19:7172500-7173886 (+)
LP/J	ENSMUSG00230054377	unclassified gene	Chr19:7969047-7970433 (+)
NOD/ShiLtJ	ENSMUSG00190052821	unclassified gene	Chr19:6267564-6268938 (+)
NZO/HlLtJ	ENSMUSG00225046871	unclassified gene	Chr19:11677888-11679274 (+)
PWK/PhJ	ENSLUMG00010008650	unclassified gene	Chr19:6558169-6559563 (+)
SPRET/EiJ	ENSMSPG00010050764	unclassified gene	Chr19:6405426-6406806 (+)
WSB/EiJ	ENSIUOG00005051282	unclassified gene	Chr19:6159915-6161321 (+)

Homology

• Gene Tree
  Gm50345
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000118183 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118183	Ensembl Gene Model | MGI Sequence Detail	1387	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm50345:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr154983	Chr19:9916278-9916291 (+)	-345 bp
Tssr154984	Chr19:9916539-9916553 (+)	-84 bp
Tssr154985	Chr19:9916617-9916635 (+)	-4 bp
Tssr154986	Chr19:9916643-9916655 (+)	19 bp