Gm50337 Gene Detail

Summary

• Symbol
  Gm50337
• Name
  predicted gene, 50337

• Feature Type
  lncRNA gene
• IDs
  MGI:6303210
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:44403345-44426325 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  711 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303210	lncRNA gene	Chr19:44403345-44426325 (+)
129S1/SvImJ	ENSMUSG00200021654	lncRNA gene	Chr19:41122778-41141048 (+)
A/J	ENSMUSG00195018738	lncRNA gene	Chr19:41250934-41269165 (+)
AKR/J	ENSMUSG00220019537	lncRNA gene	Chr19:41050310-41068590 (+)
BALB/cJ	ENSMUSG00180021441	lncRNA gene	Chr19:41503321-41521556 (+)
C3H/HeJ	ENSMUSG00175006497	lncRNA gene	Chr19:41039326-41057600 (+)
C57BL/6NJ	ENSMUSG00215005124	lncRNA gene	Chr19:41098323-41116602 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017052	lncRNA gene	Chr19:40681831-40701416 (+)
CBA/J	ENSMUSG00210019108	lncRNA gene	Chr19:41118991-41137259 (+)
DBA/2J	ENSMUSG00185009426	lncRNA gene	Chr19:41626975-41645210 (+)
FVB/NJ	ENSMUSG00205039702	lncRNA gene	Chr19:40546303-40565057 (+)
JF1/MsJ	ENSUMUG00000048188	lncRNA gene	Chr19:41769233-41788584 (+)
LP/J	ENSMUSG00230025280	lncRNA gene	Chr19:42392726-42410990 (+)
NOD/ShiLtJ	ENSMUSG00190005762	lncRNA gene	Chr19:40976744-40994977 (+)
NZO/HlLtJ	ENSMUSG00225044282	lncRNA gene	Chr19:45987006-46005297 (+)
PWK/PhJ	ENSLUMG00010001323	lncRNA gene	Chr19:40938918-40958446 (+)
SPRET/EiJ	ENSMSPG00010007924	lncRNA gene	Chr19:40684666-40703223 (+)
WSB/EiJ	ENSIUOG00005006833	lncRNA gene	Chr19:40492485-40510614 (+)

Homology

• Gene Tree
  Gm50337
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000118076 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118076	Ensembl Gene Model | MGI Sequence Detail	22981	C57BL/6J
transcript	ENSMUST00000237516	Ensembl | MGI Sequence Detail	1023	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;