Gm50332 Gene Detail

Summary

• Symbol
  Gm50332
• Name
  predicted gene, 50332

• Feature Type
  lncRNA gene
• IDs
  MGI:6303200
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:52278914-52335157 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1991 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303200	lncRNA gene	Chr19:52278914-52335157 (+)
129S1/SvImJ	ENSMUSG00200021749	lncRNA gene	Chr19:48985666-48994429 (+)
A/J	ENSMUSG00195019065	lncRNA gene	Chr19:49167753-49176503 (+)
AKR/J	ENSMUSG00220019492	lncRNA gene	Chr19:48955654-48964404 (+)
BALB/cJ	ENSMUSG00180021423	lncRNA gene	Chr19:49407464-49416214 (+)
C3H/HeJ	ENSMUSG00175006513	lncRNA gene	Chr19:48943164-48951915 (+)
C57BL/6NJ	ENSMUSG00215005164	lncRNA gene	Chr19:49047868-49056633 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017012	lncRNA gene	Chr19:48603618-48612372 (+)
CBA/J	ENSMUSG00210019327	lncRNA gene	Chr19:49022688-49031438 (+)
DBA/2J	ENSMUSG00185009278	lncRNA gene	Chr19:49521119-49529870 (+)
FVB/NJ	ENSMUSG00205037209	lncRNA gene	Chr19:48420080-48428842 (+)
JF1/MsJ	ENSUMUG00000047025	lncRNA gene	Chr19:49729286-49738150 (+)
LP/J	ENSMUSG00230028415	lncRNA gene	Chr19:50267359-50276122 (+)
NOD/ShiLtJ	ENSMUSG00190005800	lncRNA gene	Chr19:48881926-48890668 (+)
NZO/HlLtJ	ENSMUSG00225025674	lncRNA gene	Chr19:53876953-53885703 (+)
PWK/PhJ	ENSLUMG00010001256	lncRNA gene	Chr19:48761523-48770279 (+)
SPRET/EiJ	ENSMSPG00010008229	lncRNA gene	Chr19:48591051-48599946 (+)
WSB/EiJ	ENSIUOG00005007050	lncRNA gene	Chr19:48377510-48386461 (+)

Homology

• Gene Tree
  Gm50332
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00000118114 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118114	Ensembl Gene Model | MGI Sequence Detail	56244	C57BL/6J
transcript	ENSMUST00000361342	Ensembl | MGI Sequence Detail	1712	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;