Gm50325 Pseudogene Detail

Summary

• Symbol
  Gm50325
• Name
  predicted gene, 50325

• Feature Type
  pseudogene
• IDs
  MGI:6303189
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:51619987-51621065 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  161 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303189	pseudogene	Chr19:51619987-51621065 (+)
129S1/SvImJ	ENSMUSG00200021846	pseudogene	Chr19:48299078-48300156 (+)
A/J	ENSMUSG00195017879	pseudogene	Chr19:48466348-48467426 (+)
AKR/J	ENSMUSG00220019429	pseudogene	Chr19:48254127-48255205 (+)
BALB/cJ	ENSMUSG00180020932	pseudogene	Chr19:48706137-48707215 (+)
C3H/HeJ	ENSMUSG00175006535	pseudogene	Chr19:48249753-48250831 (+)
C57BL/6NJ	ENSMUSG00215004995	pseudogene	Chr19:48342151-48343229 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017179	pseudogene	Chr19:47906811-47907889 (+)
CBA/J	ENSMUSG00210019408	pseudogene	Chr19:48329250-48330328 (+)
DBA/2J	ENSMUSG00185009212	pseudogene	Chr19:48833464-48834542 (+)
FVB/NJ	ENSMUSG00205036517	pseudogene	Chr19:47722222-47723300 (+)
JF1/MsJ	ENSUMUG00000045628	pseudogene	Chr19:49019492-49020555 (+)
LP/J	ENSMUSG00230026116	pseudogene	Chr19:49580827-49581905 (+)
NOD/ShiLtJ	ENSMUSG00190005681	pseudogene	Chr19:48180134-48181212 (+)
NZO/HlLtJ	ENSMUSG00225025670	pseudogene	Chr19:53175870-53176948 (+)
PWK/PhJ	ENSLUMG00010001384	pseudogene	Chr19:48086307-48087372 (+)
SPRET/EiJ	ENSMSPG00010008157	pseudogene	Chr19:47910537-47911615 (+)
WSB/EiJ	ENSIUOG00005007148	pseudogene	Chr19:47667562-47668640 (+)

Homology

• Gene Tree
  Gm50325
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000117806 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117806	Ensembl Gene Model | MGI Sequence Detail	1079	C57BL/6J
transcript	ENSMUST00000237010	Ensembl | MGI Sequence Detail	1079	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;