Gm50321 Gene Detail

Summary

• Symbol
  Gm50321
• Name
  predicted gene, 50321

• Feature Type
  lncRNA gene
• IDs
  MGI:6303181
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:9806262-9814309 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  66 from dbSNP Build 142
• Strain Annotations
  59

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303181	lncRNA gene	Chr19:9806262-9814309 (-)
129S1/SvImJ	ENSMUSG00200052588	lncRNA gene	Chr19:6483933-6491931 (-)
A/J	ENSMUSG00195054172	lncRNA gene	Chr19:6693591-6701589 (-)
A/J	ENSMUSG00195043277	lncRNA gene	Chr5:103630515-103638747 (-)
A/J	ENSMUSG00195047946	lncRNA gene	Chr15:100757926-100765925 (-)
AKR/J	ENSMUSG00220013553	lncRNA gene	Chr13:21293459-21301460 (+)
AKR/J	ENSMUSG00220051276	lncRNA gene	Chr19:6604447-6612445 (-)
AKR/J	ENSMUSG00220053959	lncRNA gene	Chr7:24386052-24394053 (+)
BALB/cJ	ENSMUSG00180026724	lncRNA gene	Chr13:21790777-21798778 (+)
BALB/cJ	ENSMUSG00180052469	lncRNA gene	Chr19:7057572-7065570 (-)
BALB/cJ	ENSMUSG00180051378	lncRNA gene	ChrX:56218306-56226292 (-)
C3H/HeJ	ENSMUSG00175036460	lncRNA gene	Chr13:21797034-21805035 (+)
C3H/HeJ	ENSMUSG00175054337	lncRNA gene	Chr2:84761429-84769421 (-)
C3H/HeJ	ENSMUSG00175015288	lncRNA gene	Chr19:6331282-6339280 (-)
C3H/HeJ	ENSMUSG00175038205	lncRNA gene	ChrX:59808795-59816781 (-)
C57BL/6NJ	ENSMUSG00215043271	lncRNA gene	ChrX:56308618-56325125 (-)
C57BL/6NJ	ENSMUSG00215047922	lncRNA gene	Chr19:6401245-6409243 (-)
C57BL/6NJ	ENSMUSG00215047386	lncRNA gene	Chr7:36067704-36075703 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210044544	lncRNA gene	Chr2:84789313-84797305 (-)
CBA/J	ENSMUSG00210047147	lncRNA gene	ChrX:56488626-56496612 (-)
CBA/J	ENSMUSG00210050409	lncRNA gene	Chr19:6531987-6539985 (-)
DBA/2J	ENSMUSG00185036100	lncRNA gene	Chr12:110279700-110287703 (-)
DBA/2J	ENSMUSG00185037122	lncRNA gene	ChrX:68910366-68918352 (-)
DBA/2J	ENSMUSG00185054940	lncRNA gene	Chr7:21484376-21492377 (-)
DBA/2J	ENSMUSG00185052484	lncRNA gene	Chr19:6941704-6949702 (-)
DBA/2J	ENSMUSG00185022203	lncRNA gene	Chr13:22574143-22582144 (+)
FVB/NJ	ENSMUSG00205053512	lncRNA gene	Chr19:6423613-6431611 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230047021	lncRNA gene	Chr15:89863406-89871407 (+)
LP/J	ENSMUSG00230014435	lncRNA gene	Chr2:171327377-171335387 (+)
LP/J	ENSMUSG00230008725	lncRNA gene	Chr4:2299722-2307720 (+)
LP/J	ENSMUSG00230046944	lncRNA gene	Chr2:86310148-86318150 (-)
LP/J	ENSMUSG00230041992	lncRNA gene	Chr15:101107206-101115206 (-)
LP/J	ENSMUSG00230008354	lncRNA gene	Chr12:23154745-23162746 (+)
LP/J	ENSMUSG00230010062	lncRNA gene	Chr13:6387097-6395097 (-)
LP/J	ENSMUSG00230054339	lncRNA gene	Chr19:7858674-7866672 (-)
LP/J	ENSMUSG00230007134	lncRNA gene	Chr15:104098541-104106539 (-)
NOD/ShiLtJ	ENSMUSG00190051446	lncRNA gene	Chr15:97693422-97701422 (-)
NOD/ShiLtJ	ENSMUSG00190002313	lncRNA gene	Chr14:98601008-98609008 (+)
NOD/ShiLtJ	ENSMUSG00190054332	lncRNA gene	Chr11:68112379-68120353 (-)
NOD/ShiLtJ	ENSMUSG00190052211	lncRNA gene	Chr19:6157164-6165162 (-)
NOD/ShiLtJ	ENSMUSG00190052538	lncRNA gene	Chr2:84624842-84632844 (-)
NOD/ShiLtJ	ENSMUSG00190045203	lncRNA gene	Chr6:130717874-130725871 (+)
NOD/ShiLtJ	ENSMUSG00190053664	lncRNA gene	Chr7:17818639-17826640 (-)
NOD/ShiLtJ	ENSMUSG00190053212	lncRNA gene	Chr10:76162663-76170657 (-)
NOD/ShiLtJ	ENSMUSG00190052511	lncRNA gene	Chr7:37176091-37184078 (-)
NOD/ShiLtJ	ENSMUSG00190040574	lncRNA gene	Chr4:138379668-138387876 (-)
NOD/ShiLtJ	ENSMUSG00190042798	lncRNA gene	Chr13:25080070-25088071 (+)
NZO/HlLtJ	ENSMUSG00225035756	lncRNA gene	Chr12:25105133-25113134 (+)
NZO/HlLtJ	ENSMUSG00225000053	lncRNA gene	Chr2:5250747-5258748 (-)
NZO/HlLtJ	ENSMUSG00225044506	lncRNA gene	Chr15:101311509-101319509 (-)
NZO/HlLtJ	ENSMUSG00225051304	lncRNA gene	Chr15:90180006-90188007 (+)
NZO/HlLtJ	ENSMUSG00225026479	lncRNA gene	Chr11:2016250-2024249 (+)
NZO/HlLtJ	ENSMUSG00225038342	lncRNA gene	ChrX:9953846-9961846 (+)
NZO/HlLtJ	ENSMUSG00225028361	lncRNA gene	Chr15:104280809-104288807 (-)
NZO/HlLtJ	ENSMUSG00225020346	lncRNA gene	Chr8:11233169-11241167 (-)
NZO/HlLtJ	ENSMUSG00225000994	lncRNA gene	Chr4:6266035-6274033 (+)
NZO/HlLtJ	ENSMUSG00225046618	lncRNA gene	Chr19:11567500-11575498 (-)
NZO/HlLtJ	ENSMUSG00225054002	lncRNA gene	Chr2:94219841-94227843 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005050914	lncRNA gene	Chr19:6051588-6059655 (-)

Homology

• Gene Tree
  Gm50321
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  63

• Ensembl
  ENSMUSG00000118383 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118383	Ensembl Gene Model | MGI Sequence Detail	8048	C57BL/6J
transcript	ENSMUST00000236905	Ensembl | MGI Sequence Detail	2746	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;