Gm50310 Pseudogene Detail

Summary

• Symbol
  Gm50310
• Name
  predicted gene, 50310

• Feature Type
  pseudogene
• IDs
  MGI:6303163
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:24124261-24124588 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  189 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303163	pseudogene	Chr19:24124261-24124588 (-)
129S1/SvImJ	ENSMUSG00200020646	pseudogene	Chr19:20853007-20853334 (-)
A/J	ENSMUSG00195035744	pseudogene	Chr19:20991780-20992107 (-)
AKR/J	ENSMUSG00220019506	pseudogene	Chr19:21009356-21009683 (-)
BALB/cJ	ENSMUSG00180013889	pseudogene	Chr19:21327772-21328099 (-)
C3H/HeJ	ENSMUSG00175025257	pseudogene	Chr19:20699203-20699530 (-)
C57BL/6NJ	ENSMUSG00215025836	pseudogene	Chr19:20734551-20734878 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018438	pseudogene	Chr19:20601594-20601915 (-)
CBA/J	ENSMUSG00210014847	pseudogene	Chr19:20930362-20930689 (-)
DBA/2J	ENSMUSG00185026719	pseudogene	Chr19:21316855-21317182 (-)
FVB/NJ	ENSMUSG00205013704	pseudogene	Chr19:20760621-20760948 (-)
JF1/MsJ	ENSUMUG00000040664	pseudogene	Chr19:21543334-21543661 (-)
LP/J	ENSMUSG00230029136	pseudogene	Chr19:22162878-22163205 (-)
NOD/ShiLtJ	ENSMUSG00190023301	pseudogene	Chr19:20703783-20704110 (-)
NZO/HlLtJ	ENSMUSG00225034313	pseudogene	Chr19:25914962-25915289 (-)
PWK/PhJ	ENSLUMG00010035875	pseudogene	Chr19:20879532-20879859 (-)
SPRET/EiJ	ENSMSPG00010036646	pseudogene	Chr19:20875821-20876152 (-)
WSB/EiJ	ENSIUOG00005029257	pseudogene	Chr19:20419893-20420220 (-)

Homology

• Gene Tree
  Gm50310
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118277 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118277	Ensembl Gene Model | MGI Sequence Detail	328	C57BL/6J
transcript	ENSMUST00000236846	Ensembl | MGI Sequence Detail	328	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm50310:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr158648	Chr19:24124399-24124440 (-)	168 bp