Gm50302 Gene Detail

Summary

• Symbol
  Gm50302
• Name
  predicted gene, 50302

• Feature Type
  lncRNA gene
• IDs
  MGI:6303151
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:50678113-50702123 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  990 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303151	lncRNA gene	Chr19:50678113-50702123 (-)
129S1/SvImJ	ENSMUSG00200021856	lncRNA gene	Chr19:47390949-47398823 (-)
A/J	ENSMUSG00195017946	lncRNA gene	Chr19:47549383-47557263 (-)
AKR/J	ENSMUSG00220019448	lncRNA gene	Chr19:47337515-47345392 (-)
BALB/cJ	ENSMUSG00180021004	lncRNA gene	Chr19:47789247-47797129 (-)
C3H/HeJ	ENSMUSG00175006528	lncRNA gene	Chr19:47331292-47339257 (-)
C57BL/6NJ	ENSMUSG00215004990	lncRNA gene	Chr19:47415684-47423647 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017186	lncRNA gene	Chr19:46982289-46990220 (-)
CBA/J	ENSMUSG00210019400	lncRNA gene	Chr19:47410859-47418822 (-)
DBA/2J	ENSMUSG00185009238	lncRNA gene	Chr19:47914961-47922841 (-)
FVB/NJ	ENSMUSG00205036728	lncRNA gene	Chr19:46807707-46815586 (-)
JF1/MsJ	ENSUMUG00000045426	lncRNA gene	Chr19:48108116-48116060 (-)
LP/J	ENSMUSG00230026327	lncRNA gene	Chr19:48665064-48672937 (-)
NOD/ShiLtJ	ENSMUSG00190005694	lncRNA gene	Chr19:47270854-47278729 (-)
NZO/HlLtJ	ENSMUSG00225025806	lncRNA gene	Chr19:52258640-52266512 (-)
PWK/PhJ	ENSLUMG00010001379	lncRNA gene	Chr19:47187811-47195726 (-)
SPRET/EiJ	ENSMSPG00010008148	lncRNA gene	Chr19:46980646-46988671 (-)
WSB/EiJ	ENSIUOG00005007160	lncRNA gene	Chr19:46751794-46759668 (-)

Homology

• Gene Tree
  Gm50302
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000117758 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117758	Ensembl Gene Model | MGI Sequence Detail	24011	C57BL/6J
transcript	ENSMUST00000251462	Ensembl | MGI Sequence Detail	502	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm50302:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr159792	Chr19:50702073-50702087 (-)	43 bp