Gm50282 Gene Detail

Summary

• Symbol
  Gm50282
• Name
  predicted gene, 50282

• Feature Type
  lncRNA gene
• IDs
  MGI:6303117
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:47709474-47711505 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  252 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303117	lncRNA gene	Chr19:47709474-47711505 (+)
129S1/SvImJ	ENSMUSG00200021871	lncRNA gene	Chr19:44418699-44420730 (+)
A/J	ENSMUSG00195017631	lncRNA gene	Chr19:44548675-44550706 (+)
AKR/J	ENSMUSG00220019908	lncRNA gene	Chr19:44342353-44344385 (+)
BALB/cJ	ENSMUSG00180021110	lncRNA gene	Chr19:44798400-44800431 (+)
C3H/HeJ	ENSMUSG00175006454	lncRNA gene	Chr19:44339212-44341244 (+)
C57BL/6NJ	ENSMUSG00215004884	lncRNA gene	Chr19:44408519-44410550 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017251	lncRNA gene	Chr19:43997012-43999044 (+)
CBA/J	ENSMUSG00210019428	lncRNA gene	Chr19:44418701-44420733 (+)
DBA/2J	ENSMUSG00185009337	lncRNA gene	Chr19:44924660-44926691 (+)
FVB/NJ	ENSMUSG00205038524	lncRNA gene	Chr19:43836800-43838831 (+)
JF1/MsJ	ENSUMUG00000044505	lncRNA gene	Chr19:45071678-45073716 (+)
LP/J	ENSMUSG00230026013	lncRNA gene	Chr19:45694231-45696262 (+)
NOD/ShiLtJ	ENSMUSG00190005862	lncRNA gene	Chr19:44284346-44286378 (+)
NZO/HlLtJ	ENSMUSG00225044803	lncRNA gene	Chr19:49275834-49277866 (+)
PWK/PhJ	ENSLUMG00010001351	lncRNA gene	Chr19:44239472-44241509 (+)
SPRET/EiJ	ENSMSPG00010008539	lncRNA gene	Chr19:43972242-43974271 (+)
WSB/EiJ	ENSIUOG00005007084	lncRNA gene	Chr19:43794078-43796109 (+)

Homology

• Gene Tree
  Gm50282
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118149 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118149	Ensembl Gene Model | MGI Sequence Detail	2032	C57BL/6J
transcript	ENSMUST00000235588	Ensembl | MGI Sequence Detail	1102	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;