Gm50257 Pseudogene Detail

Summary

• Symbol
  Gm50257
• Name
  predicted gene, 50257

• Feature Type
  pseudogene
• IDs
  MGI:6303079
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:34526664-34526792 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  117 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303079	pseudogene	Chr19:34526664-34526792 (+)
129S1/SvImJ	ENSMUSG00200032623	pseudogene	Chr19:31246477-31246605 (+)
A/J	ENSMUSG00195012155	pseudogene	Chr19:31413122-31413250 (+)
AKR/J	ENSMUSG00220018909	pseudogene	Chr19:31309391-31309519 (+)
BALB/cJ	ENSMUSG00180032881	pseudogene	Chr19:31741976-31742104 (+)
C3H/HeJ	ENSMUSG00175045077	pseudogene	Chr19:31138717-31138845 (+)
C57BL/6NJ	ENSMUSG00215034058	pseudogene	Chr19:31165442-31165570 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015939	pseudogene	Chr19:30799270-30799398 (+)
CBA/J	ENSMUSG00210037960	pseudogene	Chr19:31191761-31191889 (+)
DBA/2J	ENSMUSG00185034735	pseudogene	Chr19:31747022-31747150 (+)
FVB/NJ	ENSMUSG00205007736	pseudogene	Chr19:30991685-30991813 (+)
JF1/MsJ	ENSUMUG00000049805	pseudogene	Chr19:31918038-31918166 (+)
LP/J	ENSMUSG00230036825	pseudogene	Chr19:32533838-32533966 (+)
NOD/ShiLtJ	ENSMUSG00190011851	pseudogene	Chr19:31116991-31117119 (+)
NZO/HlLtJ	ENSMUSG00225029697	pseudogene	Chr19:36125243-36125371 (+)
PWK/PhJ	ENSLUMG00010001425	pseudogene	Chr19:31279960-31280088 (+)
SPRET/EiJ	ENSMSPG00010023462	pseudogene	Chr19:30916244-30916372 (+)
WSB/EiJ	ENSIUOG00005040467	pseudogene	Chr19:30659807-30659935 (+)

Homology

• Gene Tree
  Gm50257
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118048 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118048	Ensembl Gene Model | MGI Sequence Detail	129	C57BL/6J
transcript	ENSMUST00000237722	Ensembl | MGI Sequence Detail	129	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;