Gm50216 Gene Detail

Summary

• Symbol
  Gm50216
• Name
  predicted gene, 50216

• Feature Type
  lncRNA gene
• IDs
  MGI:6303008
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:19848796-19853927 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  173 from dbSNP Build 142
• Strain Annotations
  166

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303008	lncRNA gene	Chr19:19848796-19853927 (-)
129S1/SvImJ	ENSMUSG00200035315	lncRNA gene	Chr11:4505379-4511997 (+)
129S1/SvImJ	ENSMUSG00200027432	lncRNA gene	Chr10:115124538-115129669 (-)
129S1/SvImJ	ENSMUSG00200045542	lncRNA gene	Chr14:49651860-49656991 (-)
A/J	ENSMUSG00195005268	lncRNA gene	Chr18:76182964-76185553 (+)
A/J	ENSMUSG00195012233	lncRNA gene	Chr19:31020346-31022935 (-)
A/J	ENSMUSG00195017170	lncRNA gene	Chr5:48322071-48324660 (+)
A/J	ENSMUSG00195048402	lncRNA gene	Chr6:65249639-65252228 (+)
A/J	ENSMUSG00195054149	lncRNA gene	Chr7:18803754-18806343 (+)
A/J	ENSMUSG00195047781	lncRNA gene	Chr7:111428210-111433341 (-)
A/J	ENSMUSG00195043282	lncRNA gene	Chr6:85407808-85410397 (+)
A/J	ENSMUSG00195035813	lncRNA gene	Chr1:81234391-81236980 (+)
A/J	ENSMUSG00195001653	lncRNA gene	Chr16:69330633-69335769 (-)
AKR/J	ENSMUSG00220005827	lncRNA gene	Chr16:69513247-69518383 (-)
AKR/J	ENSMUSG00220015185	lncRNA gene	Chr10:115156340-115161471 (-)
BALB/cJ	ENSMUSG00180019507	lncRNA gene	Chr19:17065357-17070488 (-)
BALB/cJ	ENSMUSG00180001764	lncRNA gene	Chr16:69429228-69434364 (-)
BALB/cJ	ENSMUSG00180054361	lncRNA gene	Chr7:16869090-16871679 (+)
BALB/cJ	ENSMUSG00180002262	lncRNA gene	Chr16:75098772-75101361 (+)
BALB/cJ	ENSMUSG00180035585	lncRNA gene	Chr19:31349189-31351778 (-)
BALB/cJ	ENSMUSG00180050659	lncRNA gene	Chr3:88037164-88039753 (+)
BALB/cJ	ENSMUSG00180044034	lncRNA gene	Chr6:65605505-65608094 (+)
BALB/cJ	ENSMUSG00180014130	lncRNA gene	Chr18:76753339-76755928 (+)
BALB/cJ	ENSMUSG00180019309	lncRNA gene	Chr1:81490999-81493588 (+)
C3H/HeJ	ENSMUSG00175010812	lncRNA gene	Chr11:4422762-4429380 (+)
C3H/HeJ	ENSMUSG00175004687	lncRNA gene	Chr16:69700776-69705912 (-)
C3H/HeJ	ENSMUSG00175025871	lncRNA gene	Chr10:115536692-115541823 (-)
C57BL/6NJ	ENSMUSG00215038492	lncRNA gene	Chr1:81568447-81571036 (+)
C57BL/6NJ	ENSMUSG00215038379	lncRNA gene	Chr7:85790961-85793550 (+)
C57BL/6NJ	ENSMUSG00215055087	lncRNA gene	Chr7:16155495-16158084 (+)
C57BL/6NJ	ENSMUSG00215045295	lncRNA gene	Chr6:65580054-65582643 (+)
C57BL/6NJ	ENSMUSG00215034676	lncRNA gene	Chr19:30771862-30774451 (-)
C57BL/6NJ	ENSMUSG00215026100	lncRNA gene	Chr19:16455489-16460620 (-)
C57BL/6NJ	ENSMUSG00215051231	lncRNA gene	Chr14:49385207-49390338 (-)
C57BL/6NJ	ENSMUSG00215001781	lncRNA gene	Chr16:75224373-75226962 (+)
C57BL/6NJ	ENSMUSG00215036171	lncRNA gene	Chr11:4424656-4431274 (+)
C57BL/6NJ	ENSMUSG00215024918	lncRNA gene	Chr10:115182722-115187853 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031866	lncRNA gene	Chr7:88149992-88155123 (+)
CAST/EiJ	ENSTCUG00005013621	lncRNA gene	Chr5:79662071-79667208 (-)
CAST/EiJ	ENSTCUG00005039443	lncRNA gene	Chr4:42731445-42734034 (+)
CAST/EiJ	ENSTCUG00005005101	lncRNA gene	Chr4:37844085-37846674 (+)
CAST/EiJ	ENSTCUG00005009655	lncRNA gene	Chr2:170168960-170171549 (+)
CAST/EiJ	ENSTCUG00005019082	lncRNA gene	Chr19:29992074-29994663 (-)
CAST/EiJ	ENSTCUG00005002662	lncRNA gene	Chr15:16089871-16095008 (+)
CAST/EiJ	ENSTCUG00005026601	lncRNA gene	Chr13:4375212-4377801 (-)
CAST/EiJ	ENSTCUG00005038036	lncRNA gene	Chr12:68640180-68645272 (+)
CAST/EiJ	ENSTCUG00005006443	lncRNA gene	Chr1:115167626-115172775 (+)
CAST/EiJ	ENSTCUG00005000459	lncRNA gene	Chr1:27499118-27504210 (-)
CAST/EiJ	ENSTCUG00005052983	lncRNA gene	Chr2:84699729-84704860 (-)
CAST/EiJ	ENSTCUG00005053418	lncRNA gene	Chr7:99108093-99253728 (+)
CAST/EiJ	ENSTCUG00005020067	lncRNA gene	Chr8:11334696-11337285 (-)
CAST/EiJ	ENSTCUG00005014407	lncRNA gene	Chr9:98981458-98986580 (-)
CAST/EiJ	ENSTCUG00005034467	lncRNA gene	ChrX:29781529-29786621 (+)
CBA/J	ENSMUSG00210015395	lncRNA gene	Chr16:69657606-69662742 (-)
CBA/J	ENSMUSG00210021687	lncRNA gene	Chr10:115378919-115384050 (-)
CBA/J	ENSMUSG00210018615	lncRNA gene	Chr11:4413564-4420182 (+)
DBA/2J	ENSMUSG00185047559	lncRNA gene	Chr6:86145109-86147698 (+)
DBA/2J	ENSMUSG00185052541	lncRNA gene	Chr4:141250658-141255789 (+)
DBA/2J	ENSMUSG00185019584	lncRNA gene	Chr11:4511370-4517988 (+)
DBA/2J	ENSMUSG00185004686	lncRNA gene	Chr16:69594065-69599201 (-)
DBA/2J	ENSMUSG00185035336	lncRNA gene	Chr19:31353471-31356060 (-)
DBA/2J	ENSMUSG00185000218	lncRNA gene	Chr5:50950203-50952792 (+)
FVB/NJ	ENSMUSG00205004998	lncRNA gene	Chr9:21967323-22107067 (-)
FVB/NJ	ENSMUSG00205048686	lncRNA gene	Chr14:49317789-49322920 (-)
FVB/NJ	ENSMUSG00205039556	lncRNA gene	Chr11:4420453-4427071 (+)
FVB/NJ	ENSMUSG00205029370	lncRNA gene	Chr10:114788284-114793415 (-)
FVB/NJ	ENSMUSG00205046030	lncRNA gene	Chr1:80956914-80959503 (+)
FVB/NJ	ENSMUSG00205052507	lncRNA gene	Chr6:115376630-115379219 (+)
FVB/NJ	ENSMUSG00205045411	lncRNA gene	Chr6:84771383-84773972 (+)
FVB/NJ	ENSMUSG00205012343	lncRNA gene	Chr16:69327869-69333005 (-)
FVB/NJ	ENSMUSG00205015384	lncRNA gene	Chr15:22612679-22617810 (-)
JF1/MsJ	ENSUMUG00000032625	lncRNA gene	Chr4:38234671-38237260 (+)
JF1/MsJ	ENSUMUG00000055310	lncRNA gene	Chr16:19148324-19153454 (-)
JF1/MsJ	ENSUMUG00000028719	lncRNA gene	Chr16:56404258-56409388 (-)
JF1/MsJ	ENSUMUG00000019070	lncRNA gene	Chr18:86522699-86527830 (-)
JF1/MsJ	ENSUMUG00000056767	lncRNA gene	Chr2:30149123-30154255 (+)
JF1/MsJ	ENSUMUG00000024126	lncRNA gene	Chr1:83041105-83046269 (+)
JF1/MsJ	ENSUMUG00000033716	lncRNA gene	Chr2:129784286-129786875 (+)
JF1/MsJ	ENSUMUG00000049961	lncRNA gene	Chr2:149499316-149504447 (+)
JF1/MsJ	ENSUMUG00000039878	lncRNA gene	Chr10:7473367-7475956 (+)
JF1/MsJ	ENSUMUG00000020576	lncRNA gene	Chr3:13551313-13553902 (-)
JF1/MsJ	ENSUMUG00000054968	lncRNA gene	Chr3:89275666-89278253 (+)
JF1/MsJ	ENSUMUG00000053449	lncRNA gene	Chr7:105260541-105263130 (-)
JF1/MsJ	ENSUMUG00000032882	lncRNA gene	Chr4:38862927-38865516 (-)
JF1/MsJ	ENSUMUG00000032963	lncRNA gene	Chr4:39257937-39260526 (+)
JF1/MsJ	ENSUMUG00000047247	lncRNA gene	ChrX:163276125-163278713 (-)
JF1/MsJ	ENSUMUG00000011972	lncRNA gene	Chr12:19155110-19157699 (-)
JF1/MsJ	ENSUMUG00000051388	lncRNA gene	Chr6:86090752-86093341 (-)
JF1/MsJ	ENSUMUG00000055729	lncRNA gene	Chr7:7529414-7534545 (+)
JF1/MsJ	ENSUMUG00000039217	lncRNA gene	Chr7:32378919-32384050 (-)
JF1/MsJ	ENSUMUG00000008885	lncRNA gene	Chr12:23402030-23407161 (-)
JF1/MsJ	ENSUMUG00000035741	lncRNA gene	Chr12:116916895-116922059 (+)
JF1/MsJ	ENSUMUG00000014730	lncRNA gene	Chr13:111651345-111656476 (-)
JF1/MsJ	ENSUMUG00000053504	lncRNA gene	Chr7:105626865-105631996 (+)
JF1/MsJ	ENSUMUG00000048404	lncRNA gene	Chr8:6177027-6179613 (-)
JF1/MsJ	ENSUMUG00000006398	lncRNA gene	Chr8:59554572-59559697 (-)
JF1/MsJ	ENSUMUG00000049562	lncRNA gene	Chr8:99023516-99028647 (+)
JF1/MsJ	ENSUMUG00000053481	lncRNA gene	Chr7:105620899-105626030 (+)
JF1/MsJ	ENSUMUG00000053430	lncRNA gene	Chr7:105632831-105775048 (+)
JF1/MsJ	ENSUMUG00000028414	lncRNA gene	Chr14:7551873-7557004 (-)
JF1/MsJ	ENSUMUG00000014620	lncRNA gene	Chr15:13529372-13531961 (+)
JF1/MsJ	ENSUMUG00000056887	lncRNA gene	Chr15:72098341-72100931 (-)
JF1/MsJ	ENSUMUG00000044829	lncRNA gene	Chr6:70689649-70694776 (-)
JF1/MsJ	ENSUMUG00000022092	lncRNA gene	Chr8:111495354-111500518 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190021207	lncRNA gene	Chr19:16424731-16429862 (-)
NOD/ShiLtJ	ENSMUSG00190006809	lncRNA gene	Chr9:21664337-21804076 (-)
NOD/ShiLtJ	ENSMUSG00190052170	lncRNA gene	Chr14:49618082-49623213 (-)
NOD/ShiLtJ	ENSMUSG00190019925	lncRNA gene	Chr10:115592000-115597131 (-)
NOD/ShiLtJ	ENSMUSG00190012105	lncRNA gene	Chr19:30723412-30726001 (-)
NOD/ShiLtJ	ENSMUSG00190000939	lncRNA gene	Chr5:48017181-48019770 (+)
NOD/ShiLtJ	ENSMUSG00190017060	lncRNA gene	Chr16:69561431-69566567 (-)
NOD/ShiLtJ	ENSMUSG00190047621	lncRNA gene	Chr6:85216991-85219580 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010051365	lncRNA gene	Chr14:49070916-49076047 (-)
SPRET/EiJ	ENSMSPG00010043219	lncRNA gene	Chr8:68915453-68918042 (+)
SPRET/EiJ	ENSMSPG00010010433	lncRNA gene	Chr7:110748001-110750584 (-)
SPRET/EiJ	ENSMSPG00010043972	lncRNA gene	Chr7:33588079-33593243 (-)
SPRET/EiJ	ENSMSPG00010015259	lncRNA gene	Chr6:101700978-101703567 (+)
SPRET/EiJ	ENSMSPG00010024048	lncRNA gene	Chr6:26312634-26315223 (-)
SPRET/EiJ	ENSMSPG00010015368	lncRNA gene	Chr6:20094302-20096891 (-)
SPRET/EiJ	ENSMSPG00010000937	lncRNA gene	Chr1:23352410-23354999 (+)
SPRET/EiJ	ENSMSPG00010000704	lncRNA gene	Chr1:29761113-29766272 (-)
SPRET/EiJ	ENSMSPG00010002157	lncRNA gene	Chr16:66636541-66639130 (-)
SPRET/EiJ	ENSMSPG00010031899	lncRNA gene	Chr1:32188810-32191399 (-)
SPRET/EiJ	ENSMSPG00010042265	lncRNA gene	Chr5:136229715-136232304 (+)
SPRET/EiJ	ENSMSPG00010039819	lncRNA gene	Chr5:34817774-34820363 (+)
SPRET/EiJ	ENSMSPG00010020506	lncRNA gene	Chr1:70112649-70115238 (-)
SPRET/EiJ	ENSMSPG00010048528	lncRNA gene	Chr10:76043374-76048544 (-)
SPRET/EiJ	ENSMSPG00010046203	lncRNA gene	Chr5:25261702-25264291 (-)
SPRET/EiJ	ENSMSPG00010021298	lncRNA gene	Chr11:43578598-43582568 (+)
SPRET/EiJ	ENSMSPG00010021308	lncRNA gene	Chr11:46433611-46438775 (+)
SPRET/EiJ	ENSMSPG00010046178	lncRNA gene	Chr5:20878746-20881335 (-)
SPRET/EiJ	ENSMSPG00010031855	lncRNA gene	Chr4:108387773-108390362 (-)
SPRET/EiJ	ENSMSPG00010004811	lncRNA gene	Chr18:10151714-10156879 (+)
SPRET/EiJ	ENSMSPG00010008217	lncRNA gene	Chr4:74867886-74870475 (+)
SPRET/EiJ	ENSMSPG00010010226	lncRNA gene	Chr4:46019925-46022513 (-)
SPRET/EiJ	ENSMSPG00010033999	lncRNA gene	Chr3:120731864-120734453 (-)
SPRET/EiJ	ENSMSPG00010033980	lncRNA gene	Chr3:116469306-116474470 (-)
SPRET/EiJ	ENSMSPG00010018627	lncRNA gene	Chr3:76352612-76355201 (+)
SPRET/EiJ	ENSMSPG00010003525	lncRNA gene	Chr12:18054018-18059141 (-)
SPRET/EiJ	ENSMSPG00010018534	lncRNA gene	Chr13:101503083-101505672 (+)
SPRET/EiJ	ENSMSPG00010018558	lncRNA gene	Chr13:108824783-108827372 (+)
SPRET/EiJ	ENSMSPG00010041201	lncRNA gene	Chr18:70361233-70363822 (+)
SPRET/EiJ	ENSMSPG00010008888	lncRNA gene	Chr18:75576303-75581428 (+)
SPRET/EiJ	ENSMSPG00010008503	lncRNA gene	Chr3:63369026-63371615 (-)
SPRET/EiJ	ENSMSPG00010035231	lncRNA gene	Chr15:5237973-5240562 (-)
SPRET/EiJ	ENSMSPG00010045906	lncRNA gene	Chr2:118217527-118220116 (-)
SPRET/EiJ	ENSMSPG00010039317	lncRNA gene	Chr2:65906670-65909259 (-)
SPRET/EiJ	ENSMSPG00010044156	lncRNA gene	Chr2:36930026-36932615 (+)
SPRET/EiJ	ENSMSPG00010017824	lncRNA gene	Chr13:109533296-109538460 (+)
SPRET/EiJ	ENSMSPG00010051438	lncRNA gene	Chr19:8973174-8978266 (+)
SPRET/EiJ	ENSMSPG00010042223	lncRNA gene	Chr5:131026764-131029353 (+)
SPRET/EiJ	ENSMSPG00010042643	lncRNA gene	ChrX:124230047-124232636 (+)
SPRET/EiJ	ENSMSPG00010004774	lncRNA gene	ChrX:42450468-42453057 (-)
SPRET/EiJ	ENSMSPG00010004317	lncRNA gene	Chr9:96800289-96802878 (+)
SPRET/EiJ	ENSMSPG00010004406	lncRNA gene	Chr9:73529686-73532275 (-)
SPRET/EiJ	ENSMSPG00010029909	lncRNA gene	Chr9:58667553-58672718 (+)
SPRET/EiJ	ENSMSPG00010029860	lncRNA gene	Chr9:52700413-52705583 (+)
SPRET/EiJ	ENSMSPG00010038436	lncRNA gene	Chr9:39959568-39964738 (-)
SPRET/EiJ	ENSMSPG00010043069	lncRNA gene	Chr8:101691501-101696668 (-)
WSB/EiJ	ENSIUOG00005007255	lncRNA gene	Chr19:16164692-16169823 (-)
WSB/EiJ	ENSIUOG00005010087	lncRNA gene	Chr13:105087612-105090196 (+)
WSB/EiJ	ENSIUOG00005013302	lncRNA gene	Chr12:69759864-69764957 (+)
WSB/EiJ	ENSIUOG00005008128	lncRNA gene	Chr11:4411031-4417649 (+)
WSB/EiJ	ENSIUOG00005048782	lncRNA gene	Chr4:139014752-139017341 (-)
WSB/EiJ	ENSIUOG00005053810	lncRNA gene	Chr7:10793373-10795962 (+)
WSB/EiJ	ENSIUOG00005011473	lncRNA gene	Chr8:30247510-30252602 (+)

Homology

• Gene Tree
  Gm50216
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  168

• Ensembl
  ENSMUSG00000118167 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118167	Ensembl Gene Model | MGI Sequence Detail	5132	C57BL/6J
transcript	ENSMUST00000235148	Ensembl | MGI Sequence Detail	2705	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;