Gm50207 Gene Detail

Summary

• Symbol
  Gm50207
• Name
  predicted gene, 50207

• Feature Type
  lncRNA gene
• IDs
  MGI:6302992
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:44015811-44067599 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1314 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6302992	lncRNA gene	Chr18:44015811-44067599 (+)
129S1/SvImJ	ENSMUSG00200031494	lncRNA gene	Chr18:41059243-41111010 (+)
A/J	ENSMUSG00195025733	lncRNA gene	Chr18:41217835-41271739 (+)
AKR/J	ENSMUSG00220021392	lncRNA gene	Chr18:41179466-41233356 (+)
BALB/cJ	ENSMUSG00180008112	lncRNA gene	Chr18:41667455-41726132 (+)
C3H/HeJ	ENSMUSG00175011054	lncRNA gene	Chr18:41168453-41244876 (+)
C57BL/6NJ	ENSMUSG00215009818	lncRNA gene	Chr18:40894746-40953094 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014026	lncRNA gene	Chr18:40755205-40794435 (+)
CBA/J	ENSMUSG00210022596	lncRNA gene	Chr18:41233192-41291868 (+)
DBA/2J	ENSMUSG00185028488	lncRNA gene	Chr18:41141930-41200610 (+)
FVB/NJ	ENSMUSG00205015886	lncRNA gene	Chr18:40786612-40835149 (+)
JF1/MsJ	ENSUMUG00000029024	lncRNA gene	Chr18:41292892-41332421 (+)
LP/J	ENSMUSG00230028615	lncRNA gene	Chr18:43248880-43300661 (+)
NOD/ShiLtJ	ENSMUSG00190028588	lncRNA gene	Chr18:40907533-40959359 (+)
NZO/HlLtJ	ENSMUSG00225027485	lncRNA gene	Chr18:43115960-43167751 (+)
PWK/PhJ	ENSLUMG00010021979	lncRNA gene	Chr18:41385771-41425282 (+)
SPRET/EiJ	ENSMSPG00010013259	lncRNA gene	Chr18:41522397-41561397 (+)
WSB/EiJ	ENSIUOG00005009647	lncRNA gene	Chr18:40874606-40926862 (+)

Homology

• Gene Tree
  Gm50207
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118006 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118006	Ensembl Gene Model | MGI Sequence Detail	51789	C57BL/6J
transcript	ENSMUST00000236394	Ensembl | MGI Sequence Detail	933	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;