Gm50186 Gene Detail

Summary

• Symbol
  Gm50186
• Name
  predicted gene, 50186

• Feature Type
  lncRNA gene
• IDs
  MGI:6302959
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:54072990-54075089 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  225 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6302959	lncRNA gene	Chr19:54072990-54075089 (+)
129S1/SvImJ	ENSMUSG00200015198	lncRNA gene	Chr19:50769163-50771262 (+)
A/J	ENSMUSG00195002558	lncRNA gene	Chr19:50943919-50946018 (+)
AKR/J	ENSMUSG00220017960	lncRNA gene	Chr19:50713789-50715888 (+)
BALB/cJ	ENSMUSG00180018821	lncRNA gene	Chr19:51183582-51185681 (+)
C3H/HeJ	ENSMUSG00175022795	lncRNA gene	Chr19:50719239-50721338 (+)
C57BL/6NJ	ENSMUSG00215027695	lncRNA gene	Chr19:50807627-50809726 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015770	lncRNA gene	Chr19:50370308-50372394 (+)
CBA/J	ENSMUSG00210021699	lncRNA gene	Chr19:50798728-50800827 (+)
DBA/2J	ENSMUSG00185028319	lncRNA gene	Chr19:51297198-51299297 (+)
FVB/NJ	ENSMUSG00205036050	lncRNA gene	Chr19:50182494-50184593 (+)
JF1/MsJ	ENSUMUG00000037739	lncRNA gene	Chr19:51484996-51486877 (+)
LP/J	ENSMUSG00230027766	lncRNA gene	Chr19:52050811-52052910 (+)
NOD/ShiLtJ	ENSMUSG00190013556	lncRNA gene	Chr19:50665875-50667974 (+)
NZO/HlLtJ	ENSMUSG00225025337	lncRNA gene	Chr19:55653127-55655226 (+)
PWK/PhJ	ENSLUMG00010019046	lncRNA gene	Chr19:50537682-50539563 (+)
SPRET/EiJ	ENSMSPG00010003353	lncRNA gene	Chr19:50379828-50381711 (+)
WSB/EiJ	ENSIUOG00005025214	lncRNA gene	Chr19:50164332-50166417 (+)

Homology

• Gene Tree
  Gm50186
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000117921 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117921	Ensembl Gene Model | MGI Sequence Detail	2100	C57BL/6J
transcript	ENSMUST00000236398	Ensembl | MGI Sequence Detail	1731	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;