Gm50150 Pseudogene Detail

Summary

• Symbol
  Gm50150
• Name
  predicted gene, 50150

• Feature Type
  pseudogene
• IDs
  MGI:6302907
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:38330627-38331062 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6302907	pseudogene	Chr19:38330627-38331062 (-)
129S1/SvImJ	ENSMUSG00200032391	pseudogene	Chr19:35125433-35125868 (-)
A/J	ENSMUSG00195012153	pseudogene	Chr19:35225036-35225471 (-)
AKR/J	ENSMUSG00220018879	pseudogene	Chr19:35106522-35106957 (-)
BALB/cJ	ENSMUSG00180033716	pseudogene	Chr19:35553031-35553466 (-)
C3H/HeJ	ENSMUSG00175041473	pseudogene	Chr19:34986549-34986984 (-)
C57BL/6NJ	ENSMUSG00215029262	pseudogene	Chr19:34997163-34997598 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015645	pseudogene	Chr19:34663330-34663765 (-)
CBA/J	ENSMUSG00210037335	pseudogene	Chr19:35065793-35066228 (-)
DBA/2J	ENSMUSG00185034265	pseudogene	Chr19:35585951-35586386 (-)
FVB/NJ	ENSMUSG00205007961	pseudogene	Chr19:34829963-34830398 (-)
JF1/MsJ	ENSUMUG00000046396	pseudogene	Chr19:35727593-35728033 (-)
LP/J	ENSMUSG00230036154	pseudogene	Chr19:36397218-36397653 (-)
NOD/ShiLtJ	ENSMUSG00190011927	pseudogene	Chr19:34963225-34963660 (-)
NZO/HlLtJ	ENSMUSG00225029517	pseudogene	Chr19:39947091-39947526 (-)
PWK/PhJ	ENSLUMG00010001433	pseudogene	Chr19:35108141-35108574 (-)
SPRET/EiJ	ENSMSPG00010024561	pseudogene	Chr19:34833344-34833781 (-)
WSB/EiJ	ENSIUOG00005040443	pseudogene	Chr19:34476964-34477399 (-)

Homology

• Gene Tree
  Gm50150
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118381 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118381	Ensembl Gene Model | MGI Sequence Detail	436	C57BL/6J
transcript	ENSMUST00000237671	Ensembl | MGI Sequence Detail	269	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm50150:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr159132	Chr19:38331094-38331102 (-)	-36 bp