Gm50141 Pseudogene Detail

Summary

• Symbol
  Gm50141
• Name
  predicted gene, 50141

• Feature Type
  pseudogene
• IDs
  MGI:6302892
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:38276399-38276672 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  157 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6302892	pseudogene	Chr19:38276399-38276672 (+)
129S1/SvImJ	ENSMUSG00200032318	pseudogene	Chr19:35071173-35071446 (+)
A/J	ENSMUSG00195012134	pseudogene	Chr19:35170763-35171036 (+)
AKR/J	ENSMUSG00220018842	pseudogene	Chr19:35052244-35052517 (+)
BALB/cJ	ENSMUSG00180033613	pseudogene	Chr19:35498760-35499033 (+)
C3H/HeJ	ENSMUSG00175041307	pseudogene	Chr19:34932334-34932607 (+)
C57BL/6NJ	ENSMUSG00215028980	pseudogene	Chr19:34942918-34943191 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015649	pseudogene	Chr19:34608896-34609169 (+)
CBA/J	ENSMUSG00210037220	pseudogene	Chr19:35011589-35011862 (+)
DBA/2J	ENSMUSG00185034186	pseudogene	Chr19:35531751-35532024 (+)
FVB/NJ	ENSMUSG00205007921	pseudogene	Chr19:34775691-34775964 (+)
JF1/MsJ	ENSUMUG00000046221	pseudogene	Chr19:35673059-35673332 (+)
LP/J	ENSMUSG00230036097	pseudogene	Chr19:36342973-36343246 (+)
NOD/ShiLtJ	ENSMUSG00190011894	pseudogene	Chr19:34908968-34909241 (+)
NZO/HlLtJ	ENSMUSG00225029500	pseudogene	Chr19:39892822-39893095 (+)
PWK/PhJ	ENSLUMG00010001430	pseudogene	Chr19:35054717-35054990 (+)
SPRET/EiJ	ENSMSPG00010024468	pseudogene	Chr19:34779006-34779279 (+)
WSB/EiJ	ENSIUOG00005040294	pseudogene	Chr19:34422206-34422479 (+)

Homology

• Gene Tree
  Gm50141
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118242 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118242	Ensembl Gene Model | MGI Sequence Detail	274	C57BL/6J
transcript	ENSMUST00000237799	Ensembl | MGI Sequence Detail	274	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;