Gm50126 Pseudogene Detail

Summary

• Symbol
  Gm50126
• Name
  predicted gene, 50126

• Feature Type
  pseudogene
• IDs
  MGI:6302867
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:73800275-73800548 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  106 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6302867	pseudogene	Chr18:73800275-73800548 (+)
129S1/SvImJ	ENSMUSG00200029952	pseudogene	Chr18:71021613-71021886 (+)
A/J	ENSMUSG00195005091	pseudogene	Chr18:71073024-71073296 (+)
AKR/J	ENSMUSG00220017305	pseudogene	Chr18:71015961-71016234 (+)
BALB/cJ	ENSMUSG00180013394	pseudogene	Chr18:71651985-71652257 (+)
C3H/HeJ	ENSMUSG00175013038	pseudogene	Chr18:71221851-71222124 (+)
C57BL/6NJ	ENSMUSG00215021167	pseudogene	Chr18:70563413-70563686 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015589	pseudogene	Chr18:70155986-70156259 (+)
CBA/J	ENSMUSG00210035311	pseudogene	Chr18:71179443-71179716 (+)
DBA/2J	ENSMUSG00185011381	pseudogene	Chr18:71085541-71085814 (+)
FVB/NJ	ENSMUSG00205019028	pseudogene	Chr18:70539270-70539542 (+)
JF1/MsJ	ENSUMUG00000038691	pseudogene	Chr18:70989183-70989456 (+)
LP/J	ENSMUSG00230014021	pseudogene	Chr18:73145823-73146096 (+)
NOD/ShiLtJ	ENSMUSG00190022801	pseudogene	Chr18:70818996-70819268 (+)
NZO/HlLtJ	ENSMUSG00225034753	pseudogene	Chr18:72996013-72996286 (+)
PWK/PhJ	ENSLUMG00010007067	pseudogene	Chr18:71418475-71418748 (+)
SPRET/EiJ	ENSMSPG00010009680	pseudogene	Chr18:71635548-71635821 (+)
WSB/EiJ	ENSIUOG00005006498	pseudogene	Chr18:70622159-70622432 (+)

Homology

• Gene Tree
  Gm50126
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118185 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118185	Ensembl Gene Model | MGI Sequence Detail	274	C57BL/6J
transcript	ENSMUST00000235991	Ensembl | MGI Sequence Detail	274	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;