Gm50121 Pseudogene Detail

Summary

• Symbol
  Gm50121
• Name
  predicted gene, 50121

• Feature Type
  pseudogene
• IDs
  MGI:6302862
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:27003381-27003714 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6302862	pseudogene	Chr19:27003381-27003714 (+)
129S1/SvImJ	ENSMUSG00200020692	pseudogene	Chr19:23721008-23721341 (+)
A/J	ENSMUSG00195036466	pseudogene	Chr19:23883530-23883863 (+)
AKR/J	ENSMUSG00220019781	pseudogene	Chr19:23923656-23923989 (+)
BALB/cJ	ENSMUSG00180013699	pseudogene	Chr19:24215586-24215919 (+)
C3H/HeJ	ENSMUSG00175026477	pseudogene	Chr19:23591971-23592304 (+)
C57BL/6NJ	ENSMUSG00215027815	pseudogene	Chr19:23632290-23632623 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018951	pseudogene	Chr19:23461087-23461415 (+)
CBA/J	ENSMUSG00210014834	pseudogene	Chr19:23822931-23823264 (+)
DBA/2J	ENSMUSG00185026544	pseudogene	Chr19:24209614-24209947 (+)
FVB/NJ	ENSMUSG00205014295	pseudogene	Chr19:23582322-23582655 (+)
JF1/MsJ	ENSUMUG00000037381	pseudogene	Chr19:24429656-24429984 (+)
LP/J	ENSMUSG00230029482	pseudogene	Chr19:25030450-25030783 (+)
NOD/ShiLtJ	ENSMUSG00190023483	pseudogene	Chr19:23586415-23586748 (+)
NZO/HlLtJ	ENSMUSG00225034508	pseudogene	Chr19:28781310-28781643 (+)
PWK/PhJ	ENSLUMG00010035456	pseudogene	Chr19:23804068-23804396 (+)
SPRET/EiJ	ENSMSPG00010037812	pseudogene	Chr19:23756298-23756626 (+)
WSB/EiJ	ENSIUOG00005028935	pseudogene	Chr19:23316731-23317064 (+)

Homology

• Gene Tree
  Gm50121
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118313 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118313	Ensembl Gene Model | MGI Sequence Detail	334	C57BL/6J
transcript	ENSMUST00000236369	Ensembl | MGI Sequence Detail	334	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;