Gm50034 Gene Detail

Summary

• Symbol
  Gm50034
• Name
  predicted gene, 50034

• Feature Type
  lncRNA gene
• IDs
  MGI:6275338
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:78716245-78717786 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  153 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6275338	lncRNA gene	Chr17:78716245-78717786 (+)
129S1/SvImJ	ENSMUSG00200024738	lncRNA gene	Chr17:74093722-74095263 (+)
A/J	ENSMUSG00195028948	lncRNA gene	Chr17:75442427-75443968 (+)
AKR/J	ENSMUSG00220013956	lncRNA gene	Chr17:74354711-74356253 (+)
BALB/cJ	ENSMUSG00180005197	lncRNA gene	Chr17:75152322-75153863 (+)
C3H/HeJ	ENSMUSG00175016250	lncRNA gene	Chr17:74433064-74434588 (+)
C57BL/6NJ	ENSMUSG00215016486	lncRNA gene	Chr17:74140582-74142123 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015452	lncRNA gene	Chr17:74994423-74995946 (+)
CBA/J	ENSMUSG00210021158	lncRNA gene	Chr17:74296427-74297951 (+)
DBA/2J	ENSMUSG00185012880	lncRNA gene	Chr17:77129829-77131353 (+)
FVB/NJ	ENSMUSG00205030330	lncRNA gene	Chr17:74914112-74915653 (+)
JF1/MsJ	ENSUMUG00000025003	lncRNA gene	Chr17:76825031-76826555 (+)
LP/J	ENSMUSG00230022322	lncRNA gene	Chr17:78134647-78136188 (+)
NOD/ShiLtJ	ENSMUSG00190010520	lncRNA gene	Chr17:74197832-74199374 (+)
NZO/HlLtJ	ENSMUSG00225028972	lncRNA gene	Chr17:80392184-80393725 (+)
PWK/PhJ	ENSLUMG00010005807	lncRNA gene	Chr17:74055540-74057063 (+)
SPRET/EiJ	ENSMSPG00010008679	lncRNA gene	Chr17:74529784-74531305 (+)
WSB/EiJ	ENSIUOG00005010831	lncRNA gene	Chr17:75112035-75113574 (+)

Homology

• Gene Tree
  Gm50034
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000117525 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117525	Ensembl Gene Model | MGI Sequence Detail	1542	C57BL/6J
transcript	ENSMUST00000234569	Ensembl | MGI Sequence Detail	897	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;