Gm50015 Gene Detail

Summary

• Symbol
  Gm50015
• Name
  predicted gene, 50015

• Feature Type
  lncRNA gene
• IDs
  MGI:6275306
  NCBI Gene: 118568323
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:26536392-26541596 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  404 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6275306	lncRNA gene	Chr17:26530605-26541861 (-)
129S1/SvImJ	ENSMUSG00200054149	lncRNA gene	Chr17:21982382-21987522 (-)
A/J	ENSMUSG00195054455	lncRNA gene	Chr17:23002321-23007525 (-)
AKR/J	ENSMUSG00220053474	lncRNA gene	Chr17:22046373-22051513 (-)
BALB/cJ	ENSMUSG00180050649	lncRNA gene	Chr17:22280438-22285578 (-)
C3H/HeJ	ENSMUSG00175053924	lncRNA gene	Chr17:22038619-22043759 (-)
C57BL/6NJ	ENSMUSG00215054253	lncRNA gene	Chr17:22046021-22051225 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051694	lncRNA gene	Chr17:22639883-22645094 (-)
CBA/J	ENSMUSG00210051049	lncRNA gene	Chr17:21877478-21882618 (-)
DBA/2J	ENSMUSG00185054819	lncRNA gene	Chr17:24090512-24095716 (-)
FVB/NJ	ENSMUSG00205052816	lncRNA gene	Chr17:22346265-22351469 (-)
JF1/MsJ	ENSUMUG00000057677	lncRNA gene	Chr17:23544042-23548587 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190054486	lncRNA gene	Chr17:21979250-21984454 (-)
NZO/HlLtJ	ENSMUSG00225054397	lncRNA gene	Chr17:27409595-27414799 (-)
PWK/PhJ	ENSLUMG00010053450	lncRNA gene	Chr17:21459409-21464622 (-)
SPRET/EiJ	ENSMSPG00010050084	lncRNA gene	Chr17:22786107-22790761 (-)
WSB/EiJ	ENSIUOG00005051905	lncRNA gene	Chr17:22732546-22737748 (-)

Homology

• Gene Tree
  Gm50015
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000117551 (Evidence)
• NCBI Gene
  118568323

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117551	Ensembl Gene Model | MGI Sequence Detail	5205	C57BL/6J
transcript	ENSMUST00000234840	Ensembl | MGI Sequence Detail	260	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;