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Gm49996 Pseudogene Detail
Summary
  • Symbol
    Gm49996
  • Name
    predicted gene, 49996
Location &
Maps
more
  • Sequence Map
    Chr17:93283949-93284225 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    240 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_6275279
 pseudogene Chr17:93283949-93284225 (+)
129S1/SvImJ ENSMUSG00200022908
 pseudogene Chr17:88705220-88705496 (+)
A/J ENSMUSG00195030363
 pseudogene Chr17:90111561-90111837 (+)
AKR/J ENSMUSG00220016512
 pseudogene Chr17:89084838-89085114 (+)
BALB/cJ ENSMUSG00180027495
 pseudogene Chr17:89786975-89787251 (+)
C3H/HeJ ENSMUSG00175006965
 pseudogene Chr17:89011766-89012042 (+)
C57BL/6NJ ENSMUSG00215017537
 pseudogene Chr17:88735534-88735810 (+)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005011772
 pseudogene Chr17:89601303-89601579 (+)
CBA/J ENSMUSG00210022280
 pseudogene Chr17:88912753-88913029 (+)
DBA/2J ENSMUSG00185020761
 pseudogene Chr17:91651386-91651662 (+)
FVB/NJ ENSMUSG00205006087
 pseudogene Chr17:89489746-89490022 (+)
JF1/MsJ ENSUMUG00000016367
 pseudogene Chr17:91508318-91508594 (+)
LP/J ENSMUSG00230010496
 pseudogene Chr17:92693689-92693965 (+)
NOD/ShiLtJ ENSMUSG00190010096
 pseudogene Chr17:88795911-88796187 (+)
NZO/HlLtJ no annotation
PWK/PhJ ENSLUMG00010031992
 pseudogene Chr17:88673106-88673382 (+)
SPRET/EiJ ENSMSPG00010021849
 pseudogene Chr17:89333772-89334048 (+)
WSB/EiJ ENSIUOG00005023090
 pseudogene Chr17:89688817-89689093 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    19
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000117409 Ensembl Gene Model | MGI Sequence Detail 277 C57BL/6J ±  kb
transcript ENSMUST00000234475 Ensembl | MGI Sequence Detail 277 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 1
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory