Gm49971 Gene Detail

Summary

• Symbol
  Gm49971
• Name
  predicted gene, 49971

• Feature Type
  unclassified gene
• IDs
  MGI:6275241
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:46898281-46903175 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  204 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6275241	unclassified gene	Chr18:46898281-46903175 (+)
129S1/SvImJ	ENSMUSG00200030502	unclassified gene	Chr18:43918049-43922946 (+)
A/J	ENSMUSG00195025487	unclassified gene	Chr18:44096549-44101446 (+)
AKR/J	ENSMUSG00220021931	unclassified gene	Chr18:44046420-44051317 (+)
BALB/cJ	ENSMUSG00180007889	unclassified gene	Chr18:44587665-44592562 (+)
C3H/HeJ	ENSMUSG00175011020	unclassified gene	Chr18:44105618-44110515 (+)
C57BL/6NJ	ENSMUSG00215009013	unclassified gene	Chr18:43783540-43788434 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013796	unclassified gene	Chr18:43521984-43526984 (+)
CBA/J	ENSMUSG00210022674	unclassified gene	Chr18:44157399-44162296 (+)
DBA/2J	ENSMUSG00185028746	unclassified gene	Chr18:44057591-44062488 (+)
FVB/NJ	ENSMUSG00205015248	unclassified gene	Chr18:43530432-43535329 (+)
JF1/MsJ	ENSUMUG00000031447	unclassified gene	Chr18:44072788-44077808 (+)
LP/J	ENSMUSG00230029332	unclassified gene	Chr18:46129488-46134385 (+)
NOD/ShiLtJ	ENSMUSG00190028984	unclassified gene	Chr18:43831162-43836059 (+)
NZO/HlLtJ	ENSMUSG00225027649	unclassified gene	Chr18:46008464-46013361 (+)
PWK/PhJ	ENSLUMG00010021760	unclassified gene	Chr18:44184784-44189758 (+)
SPRET/EiJ	ENSMSPG00010013222	unclassified gene	Chr18:44345394-44350421 (+)
WSB/EiJ	ENSIUOG00005009399	unclassified gene	Chr18:43751615-43756512 (+)

Homology

• Gene Tree
  Gm49971
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm49971
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000117599 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117599	Ensembl Gene Model | MGI Sequence Detail	4895	C57BL/6J

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:327181 Lewis MA, et al., Identification and characterisation of spontaneous mutations causing deafness from a targeted knockout programme. BMC Biol. 2022 Mar 17;20(1):67