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Gm49960 Pseudogene Detail
Summary
  • Symbol
    Gm49960
  • Name
    predicted gene, 49960
Location &
Maps
more
  • Sequence Map
    Chr16:10679619-10756228 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2554 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_6270684
 pseudogene Chr16:10679619-10756228 (-)
129S1/SvImJ ENSMUSG00200012301
 pseudogene Chr16:7687334-7761784 (-)
A/J ENSMUSG00195011922
 pseudogene Chr16:7223245-7299856 (-)
AKR/J ENSMUSG00220017348
 pseudogene Chr16:7512035-7588655 (-)
BALB/cJ ENSMUSG00180008874
 pseudogene Chr16:7462438-7539061 (-)
C3H/HeJ ENSMUSG00175031937
 pseudogene Chr16:7651991-7730202 (-)
C57BL/6NJ ENSMUSG00215026541
 pseudogene Chr16:7329498-7406106 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005032087
 pseudogene Chr16:7574899-7659652 (-)
CBA/J ENSMUSG00210012252
 pseudogene Chr16:7669156-7747363 (-)
DBA/2J ENSMUSG00185010159
 pseudogene Chr16:7614470-7692690 (-)
FVB/NJ ENSMUSG00205013069
 pseudogene Chr16:7532463-7609077 (-)
JF1/MsJ ENSUMUG00000039284
 pseudogene Chr16:7730107-7810707 (-)
LP/J ENSMUSG00230046894
 pseudogene Chr16:10183106-10257550 (-)
NOD/ShiLtJ ENSMUSG00190026251
 pseudogene Chr16:7714655-7791261 (-)
NZO/HlLtJ ENSMUSG00225032323
 pseudogene Chr16:13398966-13475576 (-)
PWK/PhJ ENSLUMG00010018060
 pseudogene Chr16:7579340-7663225 (-)
SPRET/EiJ ENSMSPG00010018110
 pseudogene Chr16:7547531-7631252 (-)
WSB/EiJ ENSIUOG00005017134
 pseudogene Chr16:7678240-7756516 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000117309 Ensembl Gene Model | MGI Sequence Detail 76610 C57BL/6J ±  kb
transcript ENSMUST00000233200 Ensembl | MGI Sequence Detail 7292 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 1
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory