Gm49885 Gene Detail

Summary

• Symbol
  Gm49885
• Name
  predicted gene, 49885

• Feature Type
  lncRNA gene
• IDs
  MGI:6270568
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:41058521-41068917 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  446 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6270568	lncRNA gene	Chr6:41058521-41068917 (+)
129S1/SvImJ	ENSMUSG00200047001	lncRNA gene	Chr6:38116362-38126752 (+)
A/J	ENSMUSG00195043923	lncRNA gene	Chr6:38086022-38096422 (+)
AKR/J	ENSMUSG00220009013	lncRNA gene	Chr6:37691251-37701649 (+)
BALB/cJ	ENSMUSG00180048437	lncRNA gene	Chr6:38214447-38224845 (+)
C3H/HeJ	ENSMUSG00175050698	lncRNA gene	Chr6:38041566-38051961 (+)
C57BL/6NJ	ENSMUSG00215048184	lncRNA gene	Chr6:38140221-38150617 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034651	sense overlapping lncRNA gene	Chr6:35626996-35633955 (+)
CAST/EiJ	ENSTCUG00005036666	lncRNA gene	Chr6:37609459-37626525 (+)
CBA/J	ENSMUSG00210052578	lncRNA gene	Chr6:38093329-38103717 (+)
DBA/2J	ENSMUSG00185050536	lncRNA gene	Chr6:38195804-38206198 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000025577	lncRNA gene	Chr6:37809562-37823309 (+)
LP/J	ENSMUSG00230044041	lncRNA gene	Chr6:39119509-39129907 (+)
NOD/ShiLtJ	ENSMUSG00190049582	lncRNA gene	Chr6:37985277-37995673 (+)
NZO/HlLtJ	ENSMUSG00225020897	lncRNA gene	Chr6:41102186-41112582 (+)
PWK/PhJ	ENSLUMG00010047518	lncRNA gene	Chr6:37571419-37585144 (+)
SPRET/EiJ	ENSMSPG00010032182	lncRNA gene	Chr6:38323277-38331532 (+)
WSB/EiJ	ENSIUOG00005034860	lncRNA gene	Chr6:38314565-38324893 (+)

Homology

• Gene Tree
  Gm49885
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000103833 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103833	Ensembl Gene Model | MGI Sequence Detail	10397	C57BL/6J
transcript	ENSMUST00000191867	Ensembl | MGI Sequence Detail	620	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;