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Gm49842 Pseudogene Detail
Summary
  • Symbol
    Gm49842
  • Name
    predicted gene, 49842
Location &
Maps
more
  • Sequence Map
    Chr17:57864266-57864965 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    74 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_6270512
 pseudogene Chr17:57864266-57864965 (-)
129S1/SvImJ ENSMUSG00200016969
 pseudogene Chr17:53147054-53147753 (-)
A/J ENSMUSG00195007342
 pseudogene Chr17:54536512-54537211 (-)
AKR/J ENSMUSG00220013782
 pseudogene Chr17:53580334-53581033 (-)
BALB/cJ ENSMUSG00180006389
 pseudogene Chr17:54286113-54286812 (-)
C3H/HeJ ENSMUSG00175007560
 pseudogene Chr17:53602008-53602707 (-)
C57BL/6NJ ENSMUSG00215009494
 pseudogene Chr17:53215810-53216509 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005019678
 pseudogene Chr17:54341567-54342265 (-)
CBA/J ENSMUSG00210029096
 pseudogene Chr17:53369064-53369763 (-)
DBA/2J ENSMUSG00185009418
 pseudogene Chr17:56238713-56239412 (-)
FVB/NJ ENSMUSG00205007739
 pseudogene Chr17:53915527-53916226 (-)
JF1/MsJ ENSUMUG00000035820
 pseudogene Chr17:55914280-55914979 (-)
LP/J ENSMUSG00230029475
 pseudogene Chr17:57211386-57212085 (-)
NOD/ShiLtJ ENSMUSG00190011567
 pseudogene Chr17:53364909-53365608 (-)
NZO/HlLtJ ENSMUSG00225043539
 pseudogene Chr17:59501666-59502365 (-)
PWK/PhJ ENSLUMG00010009699
 pseudogene Chr17:53175303-53176001 (-)
SPRET/EiJ no annotation
WSB/EiJ ENSIUOG00005024818
 pseudogene Chr17:54271458-54272157 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    19
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000117223 Ensembl Gene Model | MGI Sequence Detail 700 C57BL/6J ±  kb
transcript ENSMUST00000233817 Ensembl | MGI Sequence Detail 700 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 1
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory