Gm49809 Pseudogene Detail

Summary

• Symbol
  Gm49809
• Name
  predicted gene, 49809

• Feature Type
  pseudogene
• IDs
  MGI:6270476
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:10166766-10167226 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6270476	pseudogene	Chr17:10166766-10167226 (+)
129S1/SvImJ	ENSMUSG00200035221	pseudogene	Chr17:6403356-6403816 (+)
A/J	ENSMUSG00195023857	pseudogene	Chr17:6606717-6607177 (+)
AKR/J	ENSMUSG00220027735	pseudogene	Chr17:6661117-6661577 (+)
BALB/cJ	ENSMUSG00180026859	pseudogene	Chr17:6244112-6244572 (+)
C3H/HeJ	ENSMUSG00175034692	pseudogene	Chr17:6397030-6397490 (+)
C57BL/6NJ	ENSMUSG00215027170	pseudogene	Chr17:6434226-6434686 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022547	pseudogene	Chr17:6623716-6624175 (+)
CBA/J	ENSMUSG00210038410	pseudogene	Chr17:6063765-6064225 (+)
DBA/2J	ENSMUSG00185023644	pseudogene	Chr17:7156543-7157003 (+)
FVB/NJ	ENSMUSG00205009497	pseudogene	Chr17:6472549-6473009 (+)
JF1/MsJ	ENSUMUG00000036613	pseudogene	Chr17:6725664-6726123 (+)
LP/J	ENSMUSG00230034703	pseudogene	Chr17:8579454-8579914 (+)
NOD/ShiLtJ	ENSMUSG00190035887	pseudogene	Chr17:6573789-6574248 (+)
NZO/HlLtJ	ENSMUSG00225049389	pseudogene	Chr17:10498367-10498827 (+)
PWK/PhJ	ENSLUMG00010019473	pseudogene	Chr17:6560420-6560879 (+)
SPRET/EiJ	ENSMSPG00010039175	pseudogene	Chr17:7120205-7120665 (-)
WSB/EiJ	ENSIUOG00005014851	pseudogene	Chr17:6467280-6467740 (+)

Homology

• Gene Tree
  Gm49809
  

Human Diseases

• References
  6 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  372 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm49809
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000117206 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117206	Ensembl Gene Model | MGI Sequence Detail	461	C57BL/6J
transcript	ENSMUST00000233132	Ensembl | MGI Sequence Detail	461	Not Applicable

References

• Summaries
  All 373

  Diseases 6

  Phenotypes 372
• Earliest
  J:30229 Davisson MT, et al., Segmental trisomy as a mouse model for Down syndrome. Prog Clin Biol Res. 1993;384:117-33
• Latest
  J:391449 Thibodeau J, et al., Loss of cystathionine-beta-synthase contributes to elevated OXPHOS, a vulnerability in Ara-C-resistant Myeloid Leukemia in Down syndrome. Biochem Pharmacol. 2026 Feb 13;247:117815