Gm49786 Gene Detail

Summary

• Symbol
  Gm49786
• Name
  predicted gene, 49786

• Feature Type
  lncRNA gene
• IDs
  MGI:6215309
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:38903827-38904677 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6215309	lncRNA gene	Chr15:38903827-38904677 (+)
129S1/SvImJ	ENSMUSG00200028103	lncRNA gene	Chr15:35904057-35904907 (+)
A/J	ENSMUSG00195035878	lncRNA gene	Chr15:35833317-35834167 (+)
AKR/J	ENSMUSG00220029924	lncRNA gene	Chr15:35747197-35748047 (+)
BALB/cJ	ENSMUSG00180032264	lncRNA gene	Chr15:35811299-35812149 (+)
C3H/HeJ	ENSMUSG00175028434	lncRNA gene	Chr15:36006639-36007489 (+)
C57BL/6NJ	ENSMUSG00215022002	lncRNA gene	Chr15:35817769-35818619 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011346	lncRNA gene	Chr15:35832367-35833217 (+)
CBA/J	ENSMUSG00210018044	lncRNA gene	Chr15:35926908-35927758 (+)
DBA/2J	ENSMUSG00185036124	lncRNA gene	Chr15:35907754-35908604 (+)
FVB/NJ	ENSMUSG00205032370	lncRNA gene	Chr15:35799684-35800534 (+)
JF1/MsJ	ENSUMUG00000035641	lncRNA gene	Chr15:35802336-35803186 (+)
LP/J	ENSMUSG00230013188	lncRNA gene	Chr15:39285094-39285944 (+)
NOD/ShiLtJ	ENSMUSG00190033227	lncRNA gene	Chr15:35871523-35872373 (+)
NZO/HlLtJ	ENSMUSG00225031819	lncRNA gene	Chr15:39592705-39593555 (+)
PWK/PhJ	ENSLUMG00010031912	lncRNA gene	Chr15:35952459-35953309 (+)
SPRET/EiJ	ENSMSPG00010012975	lncRNA gene	Chr15:36607343-36608205 (+)
WSB/EiJ	ENSIUOG00005034832	lncRNA gene	Chr15:35920603-35921453 (+)

Homology

• Gene Tree
  Gm49786
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000115508 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115508	Ensembl Gene Model | MGI Sequence Detail	851	C57BL/6J
transcript	ENSMUST00000228534	Ensembl | MGI Sequence Detail	851	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;