Gm49764 Gene Detail

Summary

• Symbol
  Gm49764
• Name
  predicted gene, 49764

• Feature Type
  lncRNA gene
• IDs
  MGI:6215272
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:19004200-19006599 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  12 from dbSNP Build 142
• Strain Annotations
  23

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6215272	lncRNA gene	Chr12:19004200-19006599 (-)
129S1/SvImJ	ENSMUSG00200023710	lncRNA gene	Chr12:15279267-15281681 (-)
129S1/SvImJ	ENSMUSG00200023701	lncRNA gene	Chr12:15168268-15170668 (-)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	ENSMUSG00180009908	lncRNA gene	Chr12:17205582-17207982 (+)
C3H/HeJ	ENSMUSG00175006130	lncRNA gene	Chr12:15067897-15068692 (-)
C57BL/6NJ	ENSMUSG00215007489	lncRNA gene	Chr12:15667182-15669596 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006465	lncRNA gene	Chr12:15630926-15633327 (+)
CAST/EiJ	ENSTCUG00005006471	lncRNA gene	Chr12:15860793-15861589 (+)
CAST/EiJ	ENSTCUG00005006595	lncRNA gene	Chr12:14554691-14557092 (-)
CBA/J	no annotation
DBA/2J	ENSMUSG00185003857	lncRNA gene	Chr12:17723792-17726192 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000011641	lncRNA gene	Chr12:15904657-15907056 (-)
JF1/MsJ	ENSUMUG00000008710	lncRNA gene	Chr12:22478634-22481034 (+)
LP/J	ENSMUSG00230021701	lncRNA gene	Chr12:17811127-17813526 (-)
LP/J	ENSMUSG00230008358	lncRNA gene	Chr12:23244786-23247186 (-)
LP/J	ENSMUSG00230008172	lncRNA gene	Chr12:20140584-20142986 (+)
LP/J	ENSMUSG00230008407	lncRNA gene	Chr12:24690486-24692886 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225035761	lncRNA gene	Chr12:25195187-25197587 (-)
NZO/HlLtJ	ENSMUSG00225035829	lncRNA gene	Chr12:26873592-26875992 (+)
NZO/HlLtJ	ENSMUSG00225035564	lncRNA gene	Chr12:22342761-22345163 (+)
NZO/HlLtJ	ENSMUSG00225030188	lncRNA gene	Chr12:19915703-19918102 (-)
PWK/PhJ	ENSLUMG00010004395	lncRNA gene	Chr12:17317866-17320265 (+)
SPRET/EiJ	ENSMSPG00010003368	lncRNA gene	Chr12:16254769-16255182 (-)
WSB/EiJ	ENSIUOG00005001722	lncRNA gene	Chr12:16877881-16880278 (-)

Homology

• Gene Tree
  Gm49764
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00000116744 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116744	Ensembl Gene Model | MGI Sequence Detail	2400	C57BL/6J
transcript	ENSMUST00000231428	Ensembl | MGI Sequence Detail	858	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;