Gm49757 Gene Detail

Summary

• Symbol
  Gm49757
• Name
  predicted gene, 49757

• Feature Type
  lncRNA gene
• IDs
  MGI:6215259
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:30689009-30700474 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  409 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6215259	lncRNA gene	Chr16:30689009-30700474 (+)
129S1/SvImJ	ENSMUSG00200036309	lncRNA gene	Chr16:27706407-27717655 (+)
A/J	ENSMUSG00195029766	lncRNA gene	Chr16:27255858-27267287 (+)
AKR/J	ENSMUSG00220035008	lncRNA gene	Chr16:27538301-27549765 (+)
BALB/cJ	ENSMUSG00180031164	lncRNA gene	Chr16:27476898-27488325 (+)
C3H/HeJ	ENSMUSG00175038048	lncRNA gene	Chr16:27623773-27635237 (+)
C57BL/6NJ	ENSMUSG00215024551	lncRNA gene	Chr16:27493268-27504727 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035960	lncRNA gene	Chr16:27898260-27909685 (+)
CBA/J	ENSMUSG00210038264	lncRNA gene	Chr16:27665806-27677269 (+)
DBA/2J	ENSMUSG00185019814	lncRNA gene	Chr16:27581240-27592700 (+)
FVB/NJ	ENSMUSG00205025072	lncRNA gene	Chr16:27592570-27603993 (+)
JF1/MsJ	ENSUMUG00000038435	lncRNA gene	Chr16:27760570-27771890 (+)
LP/J	ENSMUSG00230034176	lncRNA gene	Chr16:30150095-30161554 (+)
NOD/ShiLtJ	ENSMUSG00190037180	lncRNA gene	Chr16:27771121-27782547 (+)
NZO/HlLtJ	ENSMUSG00225040496	lncRNA gene	Chr16:33389114-33400539 (+)
PWK/PhJ	ENSLUMG00010036649	lncRNA gene	Chr16:27597828-27609059 (+)
SPRET/EiJ	ENSMSPG00010020159	lncRNA gene	Chr16:27562920-27574262 (+)
WSB/EiJ	ENSIUOG00005035356	lncRNA gene	Chr16:27737436-27748913 (+)

Homology

• Gene Tree
  Gm49757
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000116737 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116737	Ensembl Gene Model | MGI Sequence Detail	11466	C57BL/6J
transcript	ENSMUST00000231959	Ensembl | MGI Sequence Detail	1331	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;