Gm49755 Gene Detail

Summary

• Symbol
  Gm49755
• Name
  predicted gene, 49755

• Feature Type
  lncRNA gene
• IDs
  MGI:6215255
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:30668274-30670176 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  205 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6215255	lncRNA gene	Chr16:30668274-30670176 (+)
129S1/SvImJ	ENSMUSG00200036322	lncRNA gene	Chr16:27685666-27687565 (+)
A/J	ENSMUSG00195029798	lncRNA gene	Chr16:27235124-27237026 (+)
AKR/J	ENSMUSG00220035047	lncRNA gene	Chr16:27518113-27519998 (+)
BALB/cJ	ENSMUSG00180031187	lncRNA gene	Chr16:27456164-27458066 (+)
C3H/HeJ	ENSMUSG00175038087	lncRNA gene	Chr16:27603035-27604937 (+)
C57BL/6NJ	ENSMUSG00215024672	lncRNA gene	Chr16:27472532-27474434 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035990	lncRNA gene	Chr16:27877516-27879415 (+)
CBA/J	ENSMUSG00210038332	lncRNA gene	Chr16:27645068-27646970 (+)
DBA/2J	ENSMUSG00185019830	lncRNA gene	Chr16:27560504-27562406 (+)
FVB/NJ	ENSMUSG00205025124	lncRNA gene	Chr16:27571836-27573738 (+)
JF1/MsJ	ENSUMUG00000038528	lncRNA gene	Chr16:27740072-27741951 (+)
LP/J	ENSMUSG00230034701	lncRNA gene	Chr16:30129359-30131261 (+)
NOD/ShiLtJ	ENSMUSG00190037272	lncRNA gene	Chr16:27750387-27752289 (+)
NZO/HlLtJ	ENSMUSG00225040414	lncRNA gene	Chr16:33368377-33370279 (+)
PWK/PhJ	ENSLUMG00010036686	lncRNA gene	Chr16:27577337-27579216 (+)
SPRET/EiJ	ENSMSPG00010020193	lncRNA gene	Chr16:27541943-27543832 (+)
WSB/EiJ	ENSIUOG00005035392	lncRNA gene	Chr16:27717241-27719126 (+)

Homology

• Gene Tree
  Gm49755
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000116546 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116546	Ensembl Gene Model | MGI Sequence Detail	1903	C57BL/6J
transcript	ENSMUST00000232290	Ensembl | MGI Sequence Detail	1214	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;