Gm49707 Gene Detail

Summary

• Symbol
  Gm49707
• Name
  predicted gene, 49707

• Feature Type
  lncRNA gene
• IDs
  MGI:6215171
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:90076031-90127953 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1806 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6215171	lncRNA gene	Chr16:90076031-90127953 (+)
129S1/SvImJ	ENSMUSG00200038512	lncRNA gene	Chr16:87009308-87025501 (+)
A/J	ENSMUSG00195030610	lncRNA gene	Chr16:86796364-86812553 (+)
AKR/J	ENSMUSG00220016308	lncRNA gene	Chr16:86985186-87001276 (+)
BALB/cJ	ENSMUSG00180016139	lncRNA gene	Chr16:86869703-86885895 (+)
C3H/HeJ	ENSMUSG00175016729	lncRNA gene	Chr16:87207476-87223663 (+)
C57BL/6NJ	ENSMUSG00215034515	lncRNA gene	Chr16:86997369-87013563 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021319	lncRNA gene	Chr16:86546793-86563125 (+)
CBA/J	ENSMUSG00210041989	lncRNA gene	Chr16:87095849-87111932 (+)
DBA/2J	ENSMUSG00185035523	lncRNA gene	Chr16:87043611-87059697 (+)
FVB/NJ	ENSMUSG00205025254	lncRNA gene	Chr16:86830868-86846950 (+)
JF1/MsJ	ENSUMUG00000047885	lncRNA gene	Chr16:87178148-87194393 (+)
LP/J	ENSMUSG00230035163	lncRNA gene	Chr16:89554920-89571111 (+)
NOD/ShiLtJ	ENSMUSG00190028949	lncRNA gene	Chr16:87027105-87043189 (+)
NZO/HlLtJ	ENSMUSG00225031259	lncRNA gene	Chr16:92705792-92721875 (+)
PWK/PhJ	ENSLUMG00010014384	lncRNA gene	Chr16:86818904-86835341 (+)
SPRET/EiJ	ENSMSPG00010029522	lncRNA gene	Chr16:87978198-87991115 (+)
WSB/EiJ	ENSIUOG00005021452	lncRNA gene	Chr16:86941521-86957715 (+)

Homology

• Gene Tree
  Gm49707
  

Human Diseases

• References
  4 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  63 phenotype references
  

• All Mutations and Alleles
  3
• Gene trapped
  1
• Spontaneous
  1
• Genomic Mutations
  2 involving Gm49707
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26

• Ensembl
  ENSMUSG00000116600 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116600	Ensembl Gene Model | MGI Sequence Detail	51923	C57BL/6J
transcript	ENSMUST00000232436	Ensembl | MGI Sequence Detail	1447	Not Applicable

References

• Summaries
  All 65

  Diseases 4

  Phenotypes 63
• Earliest
  J:42265 Huang TT, et al., Superoxide-mediated cytotoxicity in superoxide dismutase-deficient fetal fibroblasts. Arch Biochem Biophys. 1997 Aug 15;344(2):424-32
• Latest
  J:385727 Harada K, et al., Preventing Differentiation Towards Primitive Macrophages in Stem Cells With Down Syndrome. Immunology. 2026 Mar;177(3):596-612