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Gm49678 Gene Detail
Summary
  • Symbol
    Gm49678
  • Name
    predicted gene, 49678
  • Feature Type
    lncRNA gene
  • IDs
    MGI:6215126
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:75106782-75244270 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    4740 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_6215126
 lncRNA gene Chr16:75106782-75244270 (-)
129S1/SvImJ ENSMUSG00200016257
 lncRNA gene Chr16:72065931-72130535 (-)
A/J ENSMUSG00195023681
 lncRNA gene Chr16:71848098-71912691 (-)
AKR/J ENSMUSG00220017957
 lncRNA gene Chr16:72014325-72078916 (-)
BALB/cJ ENSMUSG00180002095
 lncRNA gene Chr16:71915912-71980488 (-)
C3H/HeJ ENSMUSG00175009033
 lncRNA gene Chr16:72189305-72253889 (-)
C57BL/6NJ ENSMUSG00215001737
 lncRNA gene Chr16:72023808-72088400 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005007913
 lncRNA gene Chr16:71939111-72001568 (-)
CBA/J ENSMUSG00210020076
 lncRNA gene Chr16:72144272-72208860 (-)
DBA/2J ENSMUSG00185005127
 lncRNA gene Chr16:72082976-72147559 (-)
FVB/NJ ENSMUSG00205015085
 lncRNA gene Chr16:71872738-71937333 (-)
JF1/MsJ ENSUMUG00000014847
 lncRNA gene Chr16:72290384-72352738 (-)
LP/J ENSMUSG00230020065
 lncRNA gene Chr16:74639697-74704302 (-)
NOD/ShiLtJ ENSMUSG00190011627
 lncRNA gene Chr16:72059794-72124381 (-)
NZO/HlLtJ ENSMUSG00225029575
 lncRNA gene Chr16:77874477-77939001 (-)
PWK/PhJ ENSLUMG00010005388
 lncRNA gene Chr16:71943929-72007974 (-)
SPRET/EiJ ENSMSPG00010015550
 lncRNA gene Chr16:72768586-72832997 (-)
WSB/EiJ ENSIUOG00005017975
 lncRNA gene Chr16:72082916-72147534 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    37
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000116610 Ensembl Gene Model | MGI Sequence Detail 137489 C57BL/6J ±  kb
transcript ENSMUST00000326792 Ensembl | MGI Sequence Detail 1513 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
    Phenotypes 1
  • Earliest
    J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory