Gm49592 Pseudogene Detail

Summary

• Symbol
  Gm49592
• Name
  predicted gene, 49592

• Feature Type
  pseudogene
• IDs
  MGI:6214997
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:97602328-97602555 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  54 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6214997	pseudogene	Chr16:97602328-97602555 (+)
129S1/SvImJ	ENSMUSG00200016908	pseudogene	Chr16:94534457-94534684 (+)
A/J	ENSMUSG00195016865	pseudogene	Chr16:94293075-94293302 (+)
AKR/J	ENSMUSG00220009715	pseudogene	Chr16:94554842-94555069 (+)
BALB/cJ	ENSMUSG00180001264	pseudogene	Chr16:94367144-94367371 (+)
C3H/HeJ	ENSMUSG00175002914	pseudogene	Chr16:94703838-94704065 (+)
C57BL/6NJ	ENSMUSG00215020623	pseudogene	Chr16:94509988-94510215 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012742	pseudogene	Chr16:94099163-94099390 (+)
CBA/J	ENSMUSG00210018085	pseudogene	Chr16:94601422-94601649 (+)
DBA/2J	ENSMUSG00185003579	pseudogene	Chr16:94549370-94549597 (+)
FVB/NJ	ENSMUSG00205015661	pseudogene	Chr16:94325959-94326186 (+)
JF1/MsJ	ENSUMUG00000018022	pseudogene	Chr16:94686209-94686436 (+)
LP/J	ENSMUSG00230028356	pseudogene	Chr16:97080892-97081119 (+)
NOD/ShiLtJ	ENSMUSG00190003953	pseudogene	Chr16:94513226-94513453 (+)
NZO/HlLtJ	ENSMUSG00225031680	pseudogene	Chr16:100197349-100197576 (+)
PWK/PhJ	ENSLUMG00010014983	pseudogene	Chr16:94335897-94336124 (+)
SPRET/EiJ	ENSMSPG00010021840	pseudogene	Chr16:95458307-95458534 (+)
WSB/EiJ	ENSIUOG00005014147	pseudogene	Chr16:94478463-94478690 (+)

Homology

• Gene Tree
  Gm49592
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Genomic Mutations
  1 involving Gm49592
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000116863 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116863	Ensembl Gene Model | MGI Sequence Detail	228	C57BL/6J
transcript	ENSMUST00000231602	Ensembl | MGI Sequence Detail	228	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76