Gm49591 Pseudogene Detail

Summary

• Symbol
  Gm49591
• Name
  predicted gene, 49591

• Feature Type
  pseudogene
• IDs
  MGI:6214996
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:78047941-78048465 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  168 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6214996	pseudogene	Chr16:78047941-78048465 (+)
129S1/SvImJ	ENSMUSG00200015831	pseudogene	Chr16:74941918-74942442 (+)
A/J	ENSMUSG00195023228	pseudogene	Chr16:74713044-74713568 (+)
AKR/J	ENSMUSG00220017740	pseudogene	Chr16:74891557-74892081 (+)
BALB/cJ	ENSMUSG00180002129	pseudogene	Chr16:74781222-74781746 (+)
C3H/HeJ	ENSMUSG00175009188	pseudogene	Chr16:75071967-75072491 (+)
C57BL/6NJ	ENSMUSG00215001771	pseudogene	Chr16:74906837-74907361 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007659	pseudogene	Chr16:74718692-74719216 (+)
CBA/J	ENSMUSG00210019687	pseudogene	Chr16:75020886-75021410 (+)
DBA/2J	ENSMUSG00185005288	pseudogene	Chr16:74947486-74948010 (+)
FVB/NJ	ENSMUSG00205016726	pseudogene	Chr16:74805943-74806467 (+)
JF1/MsJ	ENSUMUG00000015066	pseudogene	Chr16:75112984-75113508 (+)
LP/J	ENSMUSG00230020649	pseudogene	Chr16:77504033-77504557 (+)
NOD/ShiLtJ	ENSMUSG00190011043	pseudogene	Chr16:74947027-74947551 (+)
NZO/HlLtJ	ENSMUSG00225029660	pseudogene	Chr16:80707235-80707759 (+)
PWK/PhJ	ENSLUMG00010005054	pseudogene	Chr16:74752549-74753073 (+)
SPRET/EiJ	ENSMSPG00010014982	pseudogene	Chr16:75711354-75711878 (+)
WSB/EiJ	ENSIUOG00005017237	pseudogene	Chr16:74939984-74940508 (+)

Homology

• Gene Tree
  Gm49591
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Genomic Mutations
  1 involving Gm49591
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000116798 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116798	Ensembl Gene Model | MGI Sequence Detail	525	C57BL/6J
transcript	ENSMUST00000231924	Ensembl | MGI Sequence Detail	525	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76