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Gm49546 Pseudogene Detail
Summary
  • Symbol
    Gm49546
  • Name
    predicted gene, 49546
Location &
Maps
more
  • Sequence Map
    Chr16:31111348-31111627 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    97 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_6155253
 pseudogene Chr16:31111348-31111627 (-)
129S1/SvImJ ENSMUSG00200036265
 pseudogene Chr16:28123151-28123430 (-)
A/J ENSMUSG00195030149
 pseudogene Chr16:27675346-27675625 (-)
AKR/J ENSMUSG00220032538
 pseudogene Chr16:27976485-27976764 (-)
BALB/cJ ENSMUSG00180032176
 pseudogene Chr16:27896381-27896660 (-)
C3H/HeJ ENSMUSG00175037972
 pseudogene Chr16:28046859-28047138 (-)
C57BL/6NJ ENSMUSG00215027901
 pseudogene Chr16:27916344-27916623 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005037705
 pseudogene Chr16:28316328-28316607 (-)
CBA/J ENSMUSG00210040364
 pseudogene Chr16:28088882-28089161 (-)
DBA/2J ENSMUSG00185019880
 pseudogene Chr16:28004332-28004611 (-)
FVB/NJ ENSMUSG00205023557
 pseudogene Chr16:28012021-28012300 (-)
JF1/MsJ ENSUMUG00000043931
 pseudogene Chr16:28161319-28161597 (-)
LP/J ENSMUSG00230034063
 pseudogene Chr16:30573124-30573403 (-)
NOD/ShiLtJ ENSMUSG00190034191
 pseudogene Chr16:28190548-28190827 (-)
NZO/HlLtJ ENSMUSG00225040365
 pseudogene Chr16:33808538-33808817 (-)
PWK/PhJ ENSLUMG00010036112
 pseudogene Chr16:27995581-27995859 (-)
SPRET/EiJ ENSMSPG00010018873
 pseudogene Chr16:27971038-27971317 (-)
WSB/EiJ ENSIUOG00005036354
 pseudogene Chr16:28169264-28169543 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000116297 Ensembl Gene Model | MGI Sequence Detail 280 C57BL/6J ±  kb
transcript ENSMUST00000229200 Ensembl | MGI Sequence Detail 280 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 1
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory