Gm49537 Pseudogene Detail

Summary

• Symbol
  Gm49537
• Name
  predicted gene, 49537

• Feature Type
  pseudogene
• IDs
  MGI:6155239
  NCBI Gene: 118568213
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:81092926-81093361 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6155239	pseudogene	Chr15:81092923-81093363 (-)
129S1/SvImJ	ENSMUSG00200053780	pseudogene	Chr15:78195533-78195968 (-)
A/J	ENSMUSG00195051851	pseudogene	Chr15:78135605-78136092 (-)
AKR/J	ENSMUSG00220052906	pseudogene	Chr15:78178722-78179209 (-)
BALB/cJ	ENSMUSG00180053395	pseudogene	Chr15:78012649-78013136 (-)
C3H/HeJ	ENSMUSG00175053072	pseudogene	Chr15:78323647-78324134 (-)
C57BL/6NJ	ENSMUSG00215053381	pseudogene	Chr15:78104061-78104496 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005047445	pseudogene	Chr15:77631913-77632349 (-)
CBA/J	ENSMUSG00210049719	pseudogene	Chr15:78098756-78099243 (-)
DBA/2J	ENSMUSG00185052222	pseudogene	Chr15:78121798-78122233 (-)
FVB/NJ	ENSMUSG00205052043	pseudogene	Chr15:77836099-77836586 (-)
JF1/MsJ	ENSUMUG00000056188	pseudogene	Chr15:77688752-77689188 (-)
LP/J	ENSMUSG00230052749	pseudogene	Chr15:81444713-81445148 (-)
NOD/ShiLtJ	ENSMUSG00190054002	pseudogene	Chr15:78115846-78116333 (-)
NZO/HlLtJ	ENSMUSG00225050809	pseudogene	Chr15:81780177-81780612 (-)
PWK/PhJ	ENSLUMG00010053190	pseudogene	Chr15:77910433-77910869 (-)
SPRET/EiJ	ENSMSPG00010050561	pseudogene	Chr15:79563962-79564398 (-)
WSB/EiJ	ENSIUOG00005049885	pseudogene	Chr15:78182559-78183046 (-)

Homology

• Gene Tree
  Gm49537
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000116122 (Evidence)
• NCBI Gene
  118568213

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116122	Ensembl Gene Model | MGI Sequence Detail	436	C57BL/6J
transcript	ENSMUST00000230413	Ensembl | MGI Sequence Detail	436	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;