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Gm49509 Pseudogene Detail
Summary
  • Symbol
    Gm49509
  • Name
    predicted gene, 49509
Location &
Maps
more
  • Sequence Map
    Chr16:3348876-3349155 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    70 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_6155199
 pseudogene Chr16:3348876-3349155 (+)
129S1/SvImJ ENSMUSG00200011741
 pseudogene Chr16:340234-340513 (+)
A/J no annotation
AKR/J no annotation
BALB/cJ ENSMUSG00180009139
 pseudogene Chr16:141151-141430 (+)
C3H/HeJ ENSMUSG00175029656
 pseudogene Chr16:332477-332756 (+)
C57BL/6NJ ENSMUSG00215026483
 pseudogene Chr16:13684-13963 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J ENSMUSG00210012040
 pseudogene Chr16:349810-350089 (+)
DBA/2J ENSMUSG00185010541
 pseudogene Chr16:295013-295292 (+)
FVB/NJ ENSMUSG00205052261
 pseudogene Chr19:352398-352809 (+)
JF1/MsJ ENSUMUG00000040648
 pseudogene Chr16:326237-326516 (+)
LP/J ENSMUSG00230012084
 pseudogene Chr16:2836051-2836330 (+)
NOD/ShiLtJ ENSMUSG00190026612
 pseudogene Chr16:370399-370678 (+)
NZO/HlLtJ ENSMUSG00225023150
 pseudogene Chr16:6078383-6078662 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ ENSIUOG00005016958
 pseudogene Chr16:334782-335061 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    15
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000116300 Ensembl Gene Model | MGI Sequence Detail 280 C57BL/6J ±  kb
transcript ENSMUST00000229645 Ensembl | MGI Sequence Detail 280 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 1
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory