Gm49493 Gene Detail

Summary

• Symbol
  Gm49493
• Name
  predicted gene, 49493

• Feature Type
  unclassified gene
• IDs
  MGI:6155171
• Alliance
  genome feature page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr7:83541470-83545605 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  167 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6155171	unclassified gene	Chr7:83541470-83545605 (+)
129S1/SvImJ	ENSMUSG00200035578	unclassified gene	Chr7:70351904-70356043 (+)
A/J	ENSMUSG00195042010	unclassified gene	Chr7:74810696-74814835 (+)
AKR/J	ENSMUSG00220042073	unclassified gene	Chr7:68328910-68333049 (+)
BALB/cJ	ENSMUSG00180038837	unclassified gene	Chr7:71516315-71520454 (+)
C3H/HeJ	ENSMUSG00175036680	unclassified gene	Chr7:72263937-72268076 (+)
C57BL/6NJ	ENSMUSG00215033911	unclassified gene	Chr7:71371027-71375162 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046095	unclassified gene	Chr7:74821914-74826067 (+)
CBA/J	ENSMUSG00210039891	unclassified gene	Chr7:72126203-72130342 (+)
DBA/2J	ENSMUSG00185049188	unclassified gene	Chr7:76437599-76441738 (+)
FVB/NJ	ENSMUSG00205039478	unclassified gene	Chr7:72067080-72071219 (+)
JF1/MsJ	ENSUMUG00000021193	unclassified gene	Chr7:81121783-81125929 (+)
LP/J	ENSMUSG00230017324	unclassified gene	Chr7:82526995-82531134 (+)
NOD/ShiLtJ	ENSMUSG00190032835	unclassified gene	Chr7:72273364-72277503 (+)
NZO/HlLtJ	ENSMUSG00225011461	unclassified gene	Chr7:80801839-80805974 (+)
PWK/PhJ	ENSLUMG00010039250	unclassified gene	Chr7:70720636-70724778 (+)
SPRET/EiJ	ENSMSPG00010014318	unclassified gene	Chr7:71156864-71161034 (+)
WSB/EiJ	ENSIUOG00005035165	unclassified gene	Chr7:72612067-72616225 (+)

Homology

• Gene Tree
  Gm49493
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000108878 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108878	Ensembl Gene Model | MGI Sequence Detail	4136	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm49493:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr67585	Chr7:83541191-83541241 (+)	-254 bp
Tssr67586	Chr7:83541245-83541264 (+)	-215 bp
Tssr67587	Chr7:83541339-83541365 (+)	-118 bp
Tssr67588	Chr7:83541449-83541498 (+)	4 bp