Gm49483 Pseudogene Detail

Summary

• Symbol
  Gm49483
• Name
  predicted gene, 49483

• Feature Type
  pseudogene
• IDs
  MGI:6155157
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:99311355-99311574 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6155157	pseudogene	Chr15:99311355-99311574 (+)
129S1/SvImJ	ENSMUSG00200052175	pseudogene	Chr15:96514338-96514557 (+)
A/J	ENSMUSG00195046546	pseudogene	Chr15:96380700-96380919 (+)
AKR/J	ENSMUSG00220049950	pseudogene	Chr15:96387902-96388121 (+)
BALB/cJ	ENSMUSG00180047141	pseudogene	Chr15:96290376-96290595 (+)
C3H/HeJ	ENSMUSG00175047348	pseudogene	Chr15:96560722-96560941 (+)
C57BL/6NJ	ENSMUSG00215051684	pseudogene	Chr15:96349773-96349992 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046860	pseudogene	Chr15:95832076-95832295 (+)
CBA/J	ENSMUSG00210033253	pseudogene	Chr15:96347353-96347572 (+)
DBA/2J	ENSMUSG00185042510	pseudogene	Chr15:96394312-96394531 (+)
FVB/NJ	ENSMUSG00205046827	pseudogene	Chr15:96098493-96098712 (+)
JF1/MsJ	ENSUMUG00000057314	pseudogene	Chr15:95848284-95848503 (+)
LP/J	ENSMUSG00230041328	pseudogene	Chr15:99737726-99737945 (+)
NOD/ShiLtJ	ENSMUSG00190050854	pseudogene	Chr15:96365020-96365239 (+)
NZO/HlLtJ	ENSMUSG00225043423	pseudogene	Chr15:99986705-99986924 (+)
PWK/PhJ	ENSLUMG00010050822	pseudogene	Chr15:96069117-96069336 (+)
SPRET/EiJ	ENSMSPG00010050995	pseudogene	Chr15:97874516-97874735 (+)
WSB/EiJ	ENSIUOG00005041099	pseudogene	Chr15:96476052-96476271 (+)

Homology

• Gene Tree
  Gm49483
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000116039 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116039	Ensembl Gene Model | MGI Sequence Detail	220	C57BL/6J
transcript	ENSMUST00000231179	Ensembl | MGI Sequence Detail	220	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;