Gm49468 Gene Detail

Summary

• Symbol
  Gm49468
• Name
  predicted gene, 49468

• Feature Type
  lncRNA gene
• IDs
  MGI:6155130
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:86874720-86879396 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  210 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6155130	lncRNA gene	Chr15:86874720-86879396 (+)
129S1/SvImJ	ENSMUSG00200036311	lncRNA gene	Chr15:84010090-84010878 (+)
A/J	ENSMUSG00195020860	lncRNA gene	Chr15:83930362-83931151 (+)
AKR/J	ENSMUSG00220030828	lncRNA gene	Chr15:83983398-83984187 (+)
BALB/cJ	ENSMUSG00180015809	lncRNA gene	Chr15:83808177-83808966 (+)
C3H/HeJ	ENSMUSG00175028922	lncRNA gene	Chr15:84123082-84123871 (+)
C57BL/6NJ	ENSMUSG00215033511	lncRNA gene	Chr15:83894731-83895520 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030854	lncRNA gene	Chr15:83399200-83399988 (+)
CBA/J	ENSMUSG00210013198	lncRNA gene	Chr15:83892707-83893496 (+)
DBA/2J	ENSMUSG00185023243	lncRNA gene	Chr15:83916431-83917219 (+)
FVB/NJ	ENSMUSG00205035006	lncRNA gene	Chr15:83679037-83679826 (+)
JF1/MsJ	ENSUMUG00000045930	lncRNA gene	Chr15:83462965-83463755 (+)
LP/J	ENSMUSG00230045275	lncRNA gene	Chr15:87250118-87250906 (+)
NOD/ShiLtJ	ENSMUSG00190031295	lncRNA gene	Chr15:83916523-83917312 (+)
NZO/HlLtJ	ENSMUSG00225050939	lncRNA gene	Chr15:87581887-87582676 (+)
PWK/PhJ	ENSLUMG00010036238	lncRNA gene	Chr15:83644318-83645108 (+)
SPRET/EiJ	ENSMSPG00010015177	lncRNA gene	Chr15:85305341-85306132 (+)
WSB/EiJ	ENSIUOG00005011251	lncRNA gene	Chr15:83982323-83983111 (+)

Homology

• Gene Tree
  Gm49468
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000116296 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116296	Ensembl Gene Model | MGI Sequence Detail	4677	C57BL/6J
transcript	ENSMUST00000265476	Ensembl | MGI Sequence Detail	1145	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;