Gm49453 Pseudogene Detail

Summary

• Symbol
  Gm49453
• Name
  predicted gene, 49453

• Feature Type
  pseudogene
• IDs
  MGI:6155107
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:42263151-42263823 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6155107	pseudogene	Chr15:42263151-42263823 (+)
129S1/SvImJ	ENSMUSG00200028088	pseudogene	Chr15:39237878-39238550 (+)
A/J	ENSMUSG00195037717	pseudogene	Chr15:39225399-39226071 (+)
AKR/J	ENSMUSG00220031699	pseudogene	Chr15:39139585-39140257 (+)
BALB/cJ	ENSMUSG00180034265	pseudogene	Chr15:39183500-39184172 (+)
C3H/HeJ	ENSMUSG00175028207	pseudogene	Chr15:39396953-39397625 (+)
C57BL/6NJ	ENSMUSG00215021588	pseudogene	Chr15:39177818-39178490 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011205	pseudogene	Chr15:39214461-39215133 (+)
CBA/J	ENSMUSG00210018270	pseudogene	Chr15:39326801-39327473 (+)
DBA/2J	ENSMUSG00185034793	pseudogene	Chr15:39299842-39300514 (+)
FVB/NJ	ENSMUSG00205030626	pseudogene	Chr15:39184841-39185513 (+)
JF1/MsJ	ENSUMUG00000036467	pseudogene	Chr15:39171080-39171752 (+)
LP/J	ENSMUSG00230014514	pseudogene	Chr15:42622228-42622900 (+)
NOD/ShiLtJ	ENSMUSG00190032191	pseudogene	Chr15:39254078-39254750 (+)
NZO/HlLtJ	ENSMUSG00225037947	pseudogene	Chr15:42978124-42978796 (+)
PWK/PhJ	ENSLUMG00010033326	pseudogene	Chr15:39329913-39330585 (+)
SPRET/EiJ	ENSMSPG00010013676	pseudogene	Chr15:40146470-40147142 (+)
WSB/EiJ	ENSIUOG00005035294	pseudogene	Chr15:39267845-39268517 (+)

Homology

• Gene Tree
  Gm49453
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000115894 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115894	Ensembl Gene Model | MGI Sequence Detail	673	C57BL/6J
transcript	ENSMUST00000229218	Ensembl | MGI Sequence Detail	673	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;