Gm49432 Gene Detail

Summary

• Symbol
  Gm49432
• Name
  predicted gene, 49432

• Feature Type
  lncRNA gene
• IDs
  MGI:6155072
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:13555685-13557150 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  176 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6155072	lncRNA gene	Chr16:13555685-13557150 (-)
129S1/SvImJ	ENSMUSG00200046861	lncRNA gene	Chr16:10538038-10539391 (-)
A/J	ENSMUSG00195037633	lncRNA gene	Chr16:10103101-10104453 (-)
AKR/J	ENSMUSG00220047283	lncRNA gene	Chr16:10399991-10401344 (-)
BALB/cJ	ENSMUSG00180041692	lncRNA gene	Chr16:10344491-10345845 (-)
C3H/HeJ	ENSMUSG00175051695	lncRNA gene	Chr16:10504206-10505564 (-)
C57BL/6NJ	ENSMUSG00215041655	lncRNA gene	Chr16:10220227-10221579 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045997	lncRNA gene	Chr16:10400655-10402009 (-)
CBA/J	ENSMUSG00210047078	lncRNA gene	Chr16:10521185-10522545 (-)
DBA/2J	ENSMUSG00185035541	lncRNA gene	Chr16:10466713-10468071 (-)
FVB/NJ	ENSMUSG00205046452	lncRNA gene	Chr16:10460091-10461443 (-)
JF1/MsJ	ENSUMUG00000054673	lncRNA gene	Chr16:10578031-10579374 (-)
LP/J	ENSMUSG00230046307	lncRNA gene	Chr16:13033591-13034943 (-)
NOD/ShiLtJ	ENSMUSG00190049630	lncRNA gene	Chr16:10594989-10596341 (-)
NZO/HlLtJ	ENSMUSG00225032341	lncRNA gene	Chr16:16278902-16280254 (-)
PWK/PhJ	ENSLUMG00010048746	lncRNA gene	Chr16:10442784-10444138 (-)
SPRET/EiJ	ENSMSPG00010047359	lncRNA gene	Chr16:10417100-10417258 (-)
WSB/EiJ	ENSIUOG00005043654	lncRNA gene	Chr16:10531417-10532777 (-)

Homology

• Gene Tree
  Gm49432
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000115907 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115907	Ensembl Gene Model | MGI Sequence Detail	1466	C57BL/6J
transcript	ENSMUST00000229709	Ensembl | MGI Sequence Detail	414	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm49432:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr140053	Chr16:13557065-13557087 (-)	74 bp