Gm49369 Gene Detail

Summary

• Symbol
  Gm49369
• Name
  predicted gene, 49369

• Feature Type
  protein coding gene
• IDs
  MGI:6121585
• Alliance
  gene page
• Transcription Start Sites
  37 TSS

Location &
Maps

• Sequence Map
  Chr7:141924833-141936404 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  273 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6121585	protein coding gene	Chr7:141924833-141936404 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm49369
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  8
• UniProt
  2

• Ensembl
  ENSMUSG00000110040 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110040	Ensembl Gene Model | MGI Sequence Detail	11572	C57BL/6J
transcript	ENSMUST00000133843	Ensembl | MGI Sequence Detail	833	Not Applicable
polypeptide	ENSMUSP00000117247	Ensembl | MGI Sequence Detail	278	Not Applicable

Protein
Information

• UniProt
  2 Sequences
• EC
  3.4.23.5
• InterPro Domains
  IPR001461 Aspartic peptidase A1 family
  IPR001969 Aspartic peptidase, active site
  IPR021109 Aspartic peptidase domain superfamily
  IPR033121 Peptidase family A1 domain

References

• Summaries
  All 2
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm49369:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr75786	Chr7:141937236-141937273 (-)	-851 bp
Tssr75785	Chr7:141937206-141937232 (-)	-815 bp
Tssr75784	Chr7:141937186-141937203 (-)	-791 bp
Tssr75783	Chr7:141936353-141936457 (-)	-1 bp
Tssr75782	Chr7:141934719-141934733 (-)	1,678 bp
Tssr75781	Chr7:141934695-141934705 (-)	1,704 bp
Tssr75780	Chr7:141934673-141934687 (-)	1,724 bp
Tssr75779	Chr7:141934663-141934671 (-)	1,737 bp
Tssr75778	Chr7:141934627-141934636 (-)	1,772 bp
Tssr75777	Chr7:141934587-141934623 (-)	1,799 bp
Tssr75776	Chr7:141934554-141934572 (-)	1,841 bp
Tssr75775	Chr7:141934548-141934551 (-)	1,854 bp
Tssr75774	Chr7:141934527-141934546 (-)	1,867 bp
Tssr75773	Chr7:141931351-141931389 (-)	5,034 bp
Tssr75772	Chr7:141931152-141931189 (-)	5,233 bp
Tssr75771	Chr7:141931099-141931131 (-)	5,289 bp
Tssr75770	Chr7:141930882-141930905 (-)	5,510 bp
Tssr75769	Chr7:141930853-141930873 (-)	5,541 bp
Tssr75768	Chr7:141930834-141930851 (-)	5,561 bp
Tssr75767	Chr7:141930821-141930829 (-)	5,579 bp
Tssr75766	Chr7:141930803-141930819 (-)	5,593 bp
Tssr75765	Chr7:141930782-141930797 (-)	5,614 bp
Tssr75764	Chr7:141930665-141930677 (-)	5,733 bp
Tssr75763	Chr7:141930628-141930652 (-)	5,764 bp
Tssr75762	Chr7:141930602-141930615 (-)	5,795 bp
Tssr75761	Chr7:141930456-141930469 (-)	5,941 bp
Tssr75760	Chr7:141930418-141930437 (-)	5,976 bp
Tssr75759	Chr7:141930399-141930411 (-)	5,999 bp
Tssr75758	Chr7:141930363-141930395 (-)	6,025 bp
Tssr75757	Chr7:141930341-141930358 (-)	6,054 bp
Tssr75756	Chr7:141930312-141930338 (-)	6,079 bp
Tssr75755	Chr7:141930232-141930255 (-)	6,160 bp
Tssr75754	Chr7:141930121-141930128 (-)	6,279 bp
Tssr75753	Chr7:141930081-141930092 (-)	6,317 bp
Tssr75752	Chr7:141929806-141929817 (-)	6,592 bp
Tssr75751	Chr7:141929796-141929801 (-)	6,605 bp
Tssr75750	Chr7:141929729-141929736 (-)	6,671 bp