Gm49332 Pseudogene Detail

Summary

• Symbol
  Gm49332
• Name
  predicted gene, 49332

• Feature Type
  pseudogene
• IDs
  MGI:6121517
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:85608262-85608490 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  167 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6121517	pseudogene	Chr2:85608262-85608490 (+)
129S1/SvImJ	ENSMUSG00200053870	pseudogene	Chr2:82629268-82629496 (+)
A/J	ENSMUSG00195053345	pseudogene	Chr2:82716524-82716752 (+)
AKR/J	ENSMUSG00220052832	pseudogene	Chr2:82595281-82595509 (+)
BALB/cJ	ENSMUSG00180054917	pseudogene	Chr2:82644307-82644535 (+)
C3H/HeJ	ENSMUSG00175054143	pseudogene	Chr2:82782339-82782567 (+)
C57BL/6NJ	ENSMUSG00215053733	pseudogene	Chr2:82714389-82714617 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052596	pseudogene	Chr2:82142994-82143222 (+)
CBA/J	ENSMUSG00210040150	pseudogene	Chr2:82810247-82810475 (+)
DBA/2J	ENSMUSG00185057108	pseudogene	Chr2:82640511-82640739 (+)
FVB/NJ	ENSMUSG00205053071	pseudogene	Chr2:82025939-82026167 (+)
JF1/MsJ	ENSUMUG00000033639	pseudogene	Chr2:82565934-82566162 (+)
LP/J	ENSMUSG00230045714	pseudogene	Chr2:84391548-84391776 (+)
NOD/ShiLtJ	ENSMUSG00190052073	pseudogene	Chr2:82706240-82706468 (+)
NZO/HlLtJ	ENSMUSG00225053691	pseudogene	Chr2:92301334-92301562 (+)
PWK/PhJ	ENSLUMG00010052468	pseudogene	Chr2:82583177-82583401 (+)
SPRET/EiJ	ENSMSPG00010052179	pseudogene	Chr2:84560873-84561100 (+)
WSB/EiJ	ENSIUOG00005053472	pseudogene	Chr2:82643695-82643923 (+)

Homology

• Gene Tree
  Gm49332
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000111120 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111120	Ensembl Gene Model | MGI Sequence Detail	229	C57BL/6J
transcript	ENSMUST00000215522	Ensembl | MGI Sequence Detail	229	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;