Gm49322 Gene Detail

Summary

• Symbol
  Gm49322
• Name
  predicted gene, 49322

• Feature Type
  protein coding gene
• IDs
  MGI:6121503
• Alliance
  gene page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr10:80441855-80451618 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  42 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6121503	protein coding gene	Chr10:80441855-80451618 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0017509	protein coding gene	Chr10:81234904-81249656 (+)
A/J	MGP_AJ_G0017487	protein coding gene	Chr10:78391997-78404691 (+)
AKR/J	MGP_AKRJ_G0017448	protein coding gene	Chr10:80541907-80554779 (+)
BALB/cJ	MGP_BALBcJ_G0017449	protein coding gene	Chr10:78605829-78618731 (+)
C3H/HeJ	MGP_C3HHeJ_G0017272	protein coding gene	Chr10:80619114-80631986 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0017903	protein coding gene	Chr10:84038011-84052190 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0015592	protein coding gene	Chr10:74596944-74610418 (+)
CAST/EiJ	MGP_CASTEiJ_G0016839	protein coding gene	Chr10:80841054-80855237 (+)
CBA/J	MGP_CBAJ_G0017244	protein coding gene	Chr10:87299751-87315656 (+)
DBA/2J	MGP_DBA2J_G0017350	protein coding gene	Chr10:77591423-77604592 (+)
FVB/NJ	MGP_FVBNJ_G0017344	protein coding gene	Chr10:76802478-76816090 (+)
LP/J	MGP_LPJ_G0017421	protein coding gene	Chr10:81703703-81716606 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0017370	protein coding gene	Chr10:89230348-89243238 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0017944	protein coding gene	Chr10:80523792-80536495 (+)
PWK/PhJ	MGP_PWKPhJ_G0016620	protein coding gene	Chr10:77473918-77487095 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0016410	protein coding gene	Chr10:79482486-79495412 (+)
WSB/EiJ	MGP_WSBEiJ_G0016899	protein coding gene	Chr10:80560063-80575702 (+)

Homology

• Gene Tree
  Gm49322
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000035370 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000035370	Ensembl Gene Model | MGI Sequence Detail	9764	C57BL/6J
transcript	ENSMUST00000218067	Ensembl | MGI Sequence Detail	4517	Not Applicable
polypeptide	ENSMUSP00000151394	Ensembl | MGI Sequence Detail	349	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm49322:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr94579	Chr10:80442404-80442435 (+)	565 bp
Tssr94581	Chr10:80445170-80445185 (+)	3,323 bp
Tssr94582	Chr10:80450783-80450813 (+)	8,943 bp
Tssr94583	Chr10:80451225-80451269 (+)	9,392 bp