Gm49292 Gene Detail

Summary

• Symbol
  Gm49292
• Name
  predicted gene, 49292

• Feature Type
  lncRNA gene
• IDs
  MGI:6118783
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:102674459-102702430 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  971 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118783	lncRNA gene	Chr14:102674459-102702430 (+)
129S1/SvImJ	ENSMUSG00200019537	lncRNA gene	Chr14:91242852-91270817 (+)
A/J	ENSMUSG00195020429	lncRNA gene	Chr14:91356901-91384876 (+)
AKR/J	ENSMUSG00220002289	lncRNA gene	Chr14:90784073-90812050 (+)
BALB/cJ	ENSMUSG00180004720	lncRNA gene	Chr14:90839757-90867728 (+)
C3H/HeJ	ENSMUSG00175014244	lncRNA gene	Chr14:92725357-92753330 (+)
C57BL/6NJ	ENSMUSG00215018125	lncRNA gene	Chr14:90917410-90945381 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016404	lncRNA gene	Chr14:92341625-92369673 (+)
CBA/J	ENSMUSG00210007752	lncRNA gene	Chr14:91412827-91440798 (+)
DBA/2J	ENSMUSG00185011433	lncRNA gene	Chr14:96593164-96621136 (+)
FVB/NJ	ENSMUSG00205013389	lncRNA gene	Chr14:90553332-90581307 (+)
JF1/MsJ	ENSUMUG00000014833	lncRNA gene	Chr14:107588272-107616295 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190009675	lncRNA gene	Chr14:91199481-91227458 (+)
NZO/HlLtJ	ENSMUSG00225025257	lncRNA gene	Chr14:98842071-98870042 (+)
PWK/PhJ	ENSLUMG00010004568	lncRNA gene	Chr14:90465146-90493110 (+)
SPRET/EiJ	ENSMSPG00010010107	lncRNA gene	Chr14:94460881-94491027 (+)
WSB/EiJ	ENSIUOG00005018255	lncRNA gene	Chr14:90404778-90432749 (+)

Homology

• Gene Tree
  Gm49292
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000115696 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115696	Ensembl Gene Model | MGI Sequence Detail	27972	C57BL/6J
transcript	ENSMUST00000228104	Ensembl | MGI Sequence Detail	700	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;