Gm49267 Gene Detail

Summary

• Symbol
  Gm49267
• Name
  predicted gene, 49267

• Feature Type
  lncRNA gene
• IDs
  MGI:6118746
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:26609589-26644134 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1198 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118746	lncRNA gene	Chr15:26609589-26644134 (+)
129S1/SvImJ	ENSMUSG00200027851	lncRNA gene	Chr15:23605298-23639805 (+)
A/J	ENSMUSG00195013938	lncRNA gene	Chr15:23567037-23601539 (+)
AKR/J	ENSMUSG00220048249	lncRNA gene	Chr15:23421361-23455908 (+)
BALB/cJ	ENSMUSG00180005649	lncRNA gene	Chr15:23501214-23535765 (+)
C3H/HeJ	ENSMUSG00175004782	lncRNA gene	Chr15:23656456-23690953 (+)
C57BL/6NJ	ENSMUSG00215005441	lncRNA gene	Chr15:23557303-23591854 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015143	lncRNA gene	Chr15:23611755-23646310 (+)
CBA/J	ENSMUSG00210024408	lncRNA gene	Chr15:23603248-23637745 (+)
DBA/2J	ENSMUSG00185024338	lncRNA gene	Chr15:23595824-23630323 (+)
FVB/NJ	ENSMUSG00205015202	lncRNA gene	Chr15:23549363-23583859 (+)
JF1/MsJ	ENSUMUG00000014907	lncRNA gene	Chr15:23597338-23632155 (+)
LP/J	ENSMUSG00230015437	lncRNA gene	Chr15:27074878-27109379 (+)
NOD/ShiLtJ	ENSMUSG00190012498	lncRNA gene	Chr15:23574938-23609481 (+)
NZO/HlLtJ	ENSMUSG00225031871	lncRNA gene	Chr15:27317249-27351798 (+)
PWK/PhJ	ENSLUMG00010022353	lncRNA gene	Chr15:23720481-23755323 (+)
SPRET/EiJ	ENSMSPG00010024985	lncRNA gene	Chr15:24157318-24197915 (+)
WSB/EiJ	ENSIUOG00005022036	lncRNA gene	Chr15:23601805-23636366 (+)

Homology

• Gene Tree
  Gm49267
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000115433 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115433	Ensembl Gene Model | MGI Sequence Detail	34546	C57BL/6J
transcript	ENSMUST00000228205	Ensembl | MGI Sequence Detail	639	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;