Gm49254 Gene Detail

Summary

• Symbol
  Gm49254
• Name
  predicted gene, 49254

• Feature Type
  unclassified gene
• IDs
  MGI:6118725
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr15:39876199-39878174 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  222 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118725	unclassified gene	Chr15:39876199-39878174 (-)
129S1/SvImJ	ENSMUSG00200027873	unclassified gene	Chr15:36852699-36854675 (-)
A/J	ENSMUSG00195035567	unclassified gene	Chr15:36814798-36816773 (-)
AKR/J	ENSMUSG00220032022	unclassified gene	Chr15:36708806-36710776 (-)
BALB/cJ	ENSMUSG00180032841	unclassified gene	Chr15:36793053-36795028 (-)
C3H/HeJ	ENSMUSG00175027843	unclassified gene	Chr15:36967426-36969401 (-)
C57BL/6NJ	ENSMUSG00215028209	unclassified gene	Chr15:36787533-36789508 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010769	unclassified gene	Chr15:36781569-36783545 (-)
CBA/J	ENSMUSG00210018107	unclassified gene	Chr15:36908510-36910485 (-)
DBA/2J	ENSMUSG00185035208	unclassified gene	Chr15:36889334-36891309 (-)
FVB/NJ	ENSMUSG00205033100	unclassified gene	Chr15:36753603-36755573 (-)
JF1/MsJ	ENSUMUG00000037486	unclassified gene	Chr15:36751313-36753289 (-)
LP/J	ENSMUSG00230012327	unclassified gene	Chr15:40235336-40237312 (-)
NOD/ShiLtJ	ENSMUSG00190034078	unclassified gene	Chr15:36827895-36829865 (-)
NZO/HlLtJ	ENSMUSG00225037974	unclassified gene	Chr15:40567594-40569569 (-)
PWK/PhJ	ENSLUMG00010033125	unclassified gene	Chr15:36912809-36914784 (-)
SPRET/EiJ	ENSMSPG00010014228	unclassified gene	Chr15:37623004-37624974 (-)
WSB/EiJ	ENSIUOG00005035033	unclassified gene	Chr15:36872293-36874263 (-)

Homology

• Gene Tree
  Gm49254
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000115739 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115739	Ensembl Gene Model | MGI Sequence Detail	1976	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm49254:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr134154	Chr15:39878075-39878083 (-)	95 bp
Tssr134153	Chr15:39878026-39878032 (-)	145 bp