Gm49241 Pseudogene Detail

Summary

• Symbol
  Gm49241
• Name
  predicted gene, 49241

• Feature Type
  pseudogene
• IDs
  MGI:6118709
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:64913423-64913916 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  147 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118709	pseudogene	Chr15:64913423-64913916 (+)
129S1/SvImJ	ENSMUSG00200019672	pseudogene	Chr15:61950316-61950809 (+)
A/J	ENSMUSG00195028642	pseudogene	Chr15:62073157-62073650 (+)
AKR/J	ENSMUSG00220022099	pseudogene	Chr15:61922131-61922624 (+)
BALB/cJ	ENSMUSG00180023940	pseudogene	Chr15:61886250-61886746 (+)
C3H/HeJ	ENSMUSG00175005367	pseudogene	Chr15:62214153-62214649 (+)
C57BL/6NJ	ENSMUSG00215006160	pseudogene	Chr15:61901176-61901669 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020318	pseudogene	Chr15:61696329-61696825 (+)
CBA/J	ENSMUSG00210025270	pseudogene	Chr15:62009229-62009725 (+)
DBA/2J	ENSMUSG00185025248	pseudogene	Chr15:61941349-61941842 (+)
FVB/NJ	ENSMUSG00205010799	pseudogene	Chr15:61668617-61669110 (+)
JF1/MsJ	ENSUMUG00000019043	pseudogene	Chr15:61671478-61671974 (+)
LP/J	ENSMUSG00230025123	pseudogene	Chr15:65276904-65277397 (+)
NOD/ShiLtJ	ENSMUSG00190004572	pseudogene	Chr15:61989674-61990167 (+)
NZO/HlLtJ	ENSMUSG00225027536	pseudogene	Chr15:65559465-65559958 (+)
PWK/PhJ	ENSLUMG00010011224	pseudogene	Chr15:61987123-61987619 (+)
SPRET/EiJ	ENSMSPG00010004514	pseudogene	Chr15:63327972-63328464 (+)
WSB/EiJ	ENSIUOG00005021204	pseudogene	Chr15:61982409-61982902 (+)

Homology

• Gene Tree
  Gm49241
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000115677 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115677	Ensembl Gene Model | MGI Sequence Detail	494	C57BL/6J
transcript	ENSMUST00000228465	Ensembl | MGI Sequence Detail	494	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;