Gm49237 Gene Detail

Summary

• Symbol
  Gm49237
• Name
  predicted gene, 49237

• Feature Type
  lncRNA gene
• IDs
  MGI:6118702
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:100796068-100798106 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  249 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118702	lncRNA gene	Chr14:100796068-100798106 (+)
129S1/SvImJ	ENSMUSG00200019657	lncRNA gene	Chr14:89322267-89324305 (+)
A/J	ENSMUSG00195020166	lncRNA gene	Chr14:89490354-89492392 (+)
AKR/J	ENSMUSG00220002367	lncRNA gene	Chr14:88909931-88911969 (+)
BALB/cJ	ENSMUSG00180004528	lncRNA gene	Chr14:88973204-88975242 (+)
C3H/HeJ	ENSMUSG00175002714	lncRNA gene	Chr14:90839323-90841361 (+)
C57BL/6NJ	ENSMUSG00215019956	lncRNA gene	Chr14:89036753-89038791 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016306	lncRNA gene	Chr14:90465277-90467304 (+)
CBA/J	ENSMUSG00210007922	lncRNA gene	Chr14:89542574-89544612 (+)
DBA/2J	ENSMUSG00185011206	lncRNA gene	Chr14:94726633-94728671 (+)
FVB/NJ	ENSMUSG00205014417	lncRNA gene	Chr14:88630759-88632797 (+)
JF1/MsJ	ENSUMUG00000013854	lncRNA gene	Chr14:105700349-105702375 (+)
LP/J	ENSMUSG00230004055	lncRNA gene	Chr14:106575118-106577144 (+)
NOD/ShiLtJ	ENSMUSG00190009994	lncRNA gene	Chr14:89315637-89317675 (+)
NZO/HlLtJ	ENSMUSG00225025574	lncRNA gene	Chr14:96981140-96983166 (+)
PWK/PhJ	ENSLUMG00010004871	lncRNA gene	Chr14:88583396-88585434 (+)
SPRET/EiJ	ENSMSPG00010010223	lncRNA gene	Chr14:92521517-92523536 (+)
WSB/EiJ	ENSIUOG00005018613	lncRNA gene	Chr14:88517657-88519696 (+)

Homology

• Gene Tree
  Gm49237
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000115506 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115506	Ensembl Gene Model | MGI Sequence Detail	2039	C57BL/6J
transcript	ENSMUST00000228938	Ensembl | MGI Sequence Detail	707	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;