Gm49231 Gene Detail

Summary

• Symbol
  Gm49231
• Name
  predicted gene, 49231

• Feature Type
  lncRNA gene
• IDs
  MGI:6118692
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:3158046-3190446 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  42 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118692	lncRNA gene	Chr15:3158046-3190446 (+)
129S1/SvImJ	ENSMUSG00200033871	lncRNA gene	Chr15:128859-161251 (+)
A/J	ENSMUSG00195010656	lncRNA gene	Chr15:39865-72266 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180035856	lncRNA gene	Chr15:18659-51059 (+)
C3H/HeJ	ENSMUSG00175031986	lncRNA gene	Chr15:164031-196432 (+)
C57BL/6NJ	ENSMUSG00215027659	lncRNA gene	Chr15:22143-54541 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026215	lncRNA gene	Chr15:112303-144691 (+)
CBA/J	ENSMUSG00210026029	lncRNA gene	Chr15:151987-184393 (+)
DBA/2J	ENSMUSG00185033359	lncRNA gene	Chr15:134383-166771 (+)
FVB/NJ	ENSMUSG00205029935	lncRNA gene	Chr15:91282-123662 (+)
JF1/MsJ	ENSUMUG00000035268	lncRNA gene	Chr15:125443-158100 (+)
LP/J	ENSMUSG00230020087	lncRNA gene	Chr15:3635096-3667482 (+)
NOD/ShiLtJ	ENSMUSG00190010391	lncRNA gene	Chr15:131389-163760 (+)
NZO/HlLtJ	ENSMUSG00225035028	lncRNA gene	Chr15:3880291-3912687 (+)
PWK/PhJ	ENSLUMG00010036063	lncRNA gene	Chr15:228449-261057 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005030410	lncRNA gene	Chr15:50232-82574 (+)

Homology

• Gene Tree
  Gm49231
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000115013 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115013	Ensembl Gene Model | MGI Sequence Detail	32401	C57BL/6J
transcript	ENSMUST00000226888	Ensembl | MGI Sequence Detail	732	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;